Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2439 ATGGAAATGCACACATTATACACCAAATCCTTCTTGCTACCCTTATTCTTCCTTCTCCTCACATCACTCATCTCACATTCTAAAGCTTGTAATGTAATAGACAAAGAAGCATTACTACAATTCAAGAACAAAATAACCTCTGACCCATCACAACTATTGAATTCTTGGACATTGTCCACTGATTGTTGCAAAGGTTGGAATGGAGTCACATGTGATTCCACCACAGGAAGAGTTGTTAGTCTCACTCTTTCTGGAACCGTCGACGACGGCATCGATTTACCTTTTGATACATATTTATCTGGAACATTGTCACCTTATCTTGGAAATTTAACCAATCTCAAAATTTTAAGCCTCATCGGTTTAATGCAATTGAACGGTCCAATTCCTGTGGAGTTCAATAAACTTGCCAAACTTGAGAAACTTTTCCTTAATGACAATAAATTATCTGGTGATTTACCTCTTGAGATTGGATCTTTGGTCTCCTTATTAGAACTTGGTCTTTCAGGAAATAATTTTTCTGGAATAATTCCATCTTCAATTGGAAGCTTGAAGCTTCTAACTAGCCTTGATCTTAAAAAGAACAATCTTAGCGGTGGCGTTCCAGAGAGCATTGGAAATCTTAAAAATCTAGGGTTTTTAGATTTGTCAGGAAATAAAATTGGTGGAAAAATTCCAGAATCAATTGGTGGGCTTAAAAAATTAAATACACTTGATATGATGCAAAACAAGATTGAAGGAAATGTTCCTGTTTCTATTGGAGGACTTAGTTCTTTAACATTTTTAAGGTTATCAGATAATTTGTTAAGTGGTGTTTTACCTTCTGAGATTGGGAATCTCAAGAATTTGAAAAATTTGAATCTTCAGAACAACATGCTTAATGGGAATTTGCCTGCTTCTATTGGGAATTTAAACGGTTTGAGGGAATTATCTCTCGGCAATAATAAGTTTTCTGGAAAAATTCCAGCAACGTTTGGAAATTTGAAGGATTTGCAAAATGTGGATTTTTCATGA 1011 0.3492 MEMHTLYTKSFLLPLFFLLLTSLISHSKACNVIDKEALLQFKNKITSDPSQLLNSWTLSTDCCKGWNGVTCDSTTGRVVSLTLSGTVDDGIDLPFDTYLSGTLSPYLGNLTNLKILSLIGLMQLNGPIPVEFNKLAKLEKLFLNDNKLSGDLPLEIGSLVSLLELGLSGNNFSGIIPSSIGSLKLLTSLDLKKNNLSGGVPESIGNLKNLGFLDLSGNKIGGKIPESIGGLKKLNTLDMMQNKIEGNVPVSIGGLSSLTFLRLSDNLLSGVLPSEIGNLKNLKNLNLQNNMLNGNLPASIGNLNGLRELSLGNNKFSGKIPATFGNLKDLQNVDFS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2439 336 Pfam Leucine rich repeat 162 220 IPR001611 GO:0005515
Mtr8g2439 336 Gene3D Ribonuclease Inhibitor 250 336 IPR032675 -
Mtr8g2439 336 SUPERFAMILY L domain-like 29 336 - -
Mtr8g2439 336 Gene3D Ribonuclease Inhibitor 159 249 IPR032675 -
Mtr8g2439 336 SMART LRR_typ_2 207 231 IPR003591 -
Mtr8g2439 336 SMART LRR_typ_2 135 159 IPR003591 -
Mtr8g2439 336 SMART LRR_typ_2 255 278 IPR003591 -
Mtr8g2439 336 SMART LRR_typ_2 303 326 IPR003591 -
Mtr8g2439 336 Gene3D Ribonuclease Inhibitor 33 158 IPR032675 -
Mtr8g2439 336 Pfam Leucine Rich Repeat 306 327 IPR001611 GO:0005515
Mtr8g2439 336 PANTHER POLYGALACTURONASE INHIBITOR 1 12 247 - -
Mtr8g2439 336 PANTHER POLYGALACTURONASE INHIBITOR 1 172 279 - -
Mtr8g2439 336 PANTHER POLYGALACTURONASE INHIBITOR 1 228 334 - -
Mtr8g2439 336 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Mtr8g2439 336 SMART LRR_sd22_2 279 305 - -
Mtr8g2439 336 SMART LRR_sd22_2 231 257 - -
Mtr8g2439 336 SMART LRR_sd22_2 135 150 - -
Mtr8g2439 336 SMART LRR_sd22_2 207 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2439 Mtr-Chr8 34814036 34815046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2439 99 336 Receptor kinase-like Gene Family AT4G08850 36.975 1.17e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2439 - - mtr:MTR_8g076360 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2439 8 34814036 34815046 Mtr8g2439 8 34814036 34815046 ECH