Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2417 ATGGAACTAAAGGTTGGTGATGATGGTGAGACAGACAGAAAACAATATGGGAGTGACTTGTTTTGGTGGTTAACAGTTTCCATCGTAGCGATCCTTGTAGTAGGTGCCGGTGTTTTTACTATACTAATTAACTTTCATCATCATCGCTCTCAATCTCATTCATCTCAACCCTACGACATCGTTCCAAAATATGCCTCTTCTCTTCAATTAGCCCTCCAATTTTTCGACGTCCAAAAATCTGGTAAGGTACAGAATAATAGGGTTTGGTGGAGAGGGGATTCGGGGCTTAGAGATGGGAGTGAAGAGAATTTGGATTTGTCGAAAGGATTGTATGATGCTGGTGATCTTATGAAATTTGGGTTTCCAATGGCTTTCACTGCTACTGTCTTGTCTTGGGCTATTCTTGAATATGGAAATAACATGGATGCAGTGAAGCAGCTAGACTATGCACTAGAATCACTCAAGTGGATCACTGATTATCTTGTTAACGCACATCCTTTCGCTGATGTCCTTTACATTCAGGTAGGGGATCCTGAGGTGGACCACAATTGCTGGGAAAGGCCTGAAAACATGACTGAGAAAAGGCCACTCACTCAAGTTAACTCATCTTTTCCAGGAACAGAAGTTGCAGCAGAAACAGCAGCTGCACTTGCCGCAGCATCTTTGGTTTTTAAGGAGATTAATCTCACTTATTCTGAGATTCTTCGTGAACATGCTCAGCAACTGTTTATGTTCGCTGATACATACAGAGTTTCCTACAGTGTCAGTATCCCTCAAGTTGGAAAATACTATAACTCATCTGGTTATGGAGATGAACTTTTATGGGCTAGTAGTTGGCTCTATCATGCAACAAAGGATCCCTCATACCTTACTTATGTGACAGAGACGAATGAAAATGAGTTTGGTAGTATAGGAAGTGTATCATGGTTTAGTTGGGATGATAAACATGCTGCAACTCAGGTATGA 966 0.413 MELKVGDDGETDRKQYGSDLFWWLTVSIVAILVVGAGVFTILINFHHHRSQSHSSQPYDIVPKYASSLQLALQFFDVQKSGKVQNNRVWWRGDSGLRDGSEENLDLSKGLYDAGDLMKFGFPMAFTATVLSWAILEYGNNMDAVKQLDYALESLKWITDYLVNAHPFADVLYIQVGDPEVDHNCWERPENMTEKRPLTQVNSSFPGTEVAAETAAALAAASLVFKEINLTYSEILREHAQQLFMFADTYRVSYSVSIPQVGKYYNSSGYGDELLWASSWLYHATKDPSYLTYVTETNENEFGSIGSVSWFSWDDKHAATQV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2417 321 Pfam Glycosyl hydrolase family 9 64 320 IPR001701 GO:0004553|GO:0005975
Mtr8g2417 321 PANTHER ENDOGLUCANASE 2 18 321 - -
Mtr8g2417 321 Gene3D - 62 321 IPR012341 GO:0005975
Mtr8g2417 321 PANTHER ENDO-1,4-BETA-GLUCANASE 18 321 - -
Mtr8g2417 321 SUPERFAMILY Six-hairpin glycosidases 63 320 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2417 Mtr-Chr8 34611212 34612961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2417 23 321 Glycoside Hydrolase AT1G75680 63.366 4.31e-124 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2417 - K01179 gmx:100782202 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2417 8 34611212 34612961 Mtr8g2417 8 34611212 34612961 ECH