Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2416 ATGGGGGAAGGAAGAGAAGGTGATTGGGAGTGCAGTGGTTGCAACAACAGAAACTACGCTTTCAGATCATTCTGCAATCGATGCAAACAACCACGTCTTCTTGTTGATACCAAAACCCCTGCTGATTCCAAATGGCTTCCTCGTATTGGTGATTGGATCTGCACCGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAGAAATGCGGACAACCAAAGGAGGTAGCGGCCATGCCAGCAATTGCTATGACAGGAGCATCTTTCTCTGCTTATCCACATTATTTTTCCAGGGTTCCGGGAGGACCAGAGCAAAGGATGAATATTGGATTGATTGGAAACGGTGGGCCACCACAGTCGCTGAATTTGAATTATAACTGGCCTGTTACTGGAGCACAAAAGTTTGGTCTCCAGTCAGTTTCCCTTTGGCCACCAGGTGTAAATTATAGTTCTGGACATCCATATGAAAATTCCTCTAGTCAGAACCCAAATGGGTGGCGCAATGGGGACTGGGTCTGTAACTGTGGCTTCCACAATTACTCCTCACGCGCACAATGTAAAAAATGCAATGCTTCTCCACCAGCACTTGGCACAAAACGGTTAGCTTCTGAAGAATTGGGTTATGACTGGGATAACAAGAGATTGAACGTAGGATCTACGAATGATCAGCAGCAAGCAGTAGGGACCAGTGCAGAACCAAGACCTGCACTCTTTCCTGCTTATACCGGCATTAACTCTAGTTCAGCACCAAGTTTGCCAATGCCCCCACTCTTTCCAATTCCACCTCAAGTTTCTTCTACTGCACTCCTTGGAAAAGGAGCTAAGCAATGGCGAAGTGGTGATTGGATGTGCACAAATTGCAACAATCATAATTATGCGTCCAGACTAGAGTGTAACAGGTGTAAAACGCTTAGAGTGGCACCCATGCAACCCGTCAATGTTGTGTAA 951 0.4595 MGEGREGDWECSGCNNRNYAFRSFCNRCKQPRLLVDTKTPADSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMTGASFSAYPHYFSRVPGGPEQRMNIGLIGNGGPPQSLNLNYNWPVTGAQKFGLQSVSLWPPGVNYSSGHPYENSSSQNPNGWRNGDWVCNCGFHNYSSRAQCKKCNASPPALGTKRLASEELGYDWDNKRLNVGSTNDQQQAVGTSAEPRPALFPAYTGINSSSAPSLPMPPLFPIPPQVSSTALLGKGAKQWRSGDWMCTNCNNHNYASRLECNRCKTLRVAPMQPVNVV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2416 316 SMART zf_4 50 74 IPR001876 -
Mtr8g2416 316 SMART zf_4 170 193 IPR001876 -
Mtr8g2416 316 SMART zf_4 7 31 IPR001876 -
Mtr8g2416 316 SMART zf_4 281 305 IPR001876 -
Mtr8g2416 316 PANTHER ZINC FINGER PROTEIN 166 226 - -
Mtr8g2416 316 PANTHER ZINC FINGER PROTEIN 3 136 - -
Mtr8g2416 316 PANTHER ZINC FINGER PROTEIN 265 315 - -
Mtr8g2416 316 ProSiteProfiles Zinc finger RanBP2 type profile. 279 308 IPR001876 -
Mtr8g2416 316 SUPERFAMILY Ran binding protein zinc finger-like 161 193 IPR036443 -
Mtr8g2416 316 ProSitePatterns Zinc finger RanBP2-type signature. 52 71 IPR001876 -
Mtr8g2416 316 Gene3D - 3 33 - -
Mtr8g2416 316 Gene3D - 159 196 - -
Mtr8g2416 316 Gene3D - 42 77 - -
Mtr8g2416 316 Gene3D - 274 308 - -
Mtr8g2416 316 ProSiteProfiles Zinc finger RanBP2 type profile. 5 34 IPR001876 -
Mtr8g2416 316 Pfam Zn-finger in Ran binding protein and others 48 76 IPR001876 -
Mtr8g2416 316 Pfam Zn-finger in Ran binding protein and others 5 32 IPR001876 -
Mtr8g2416 316 Pfam Zn-finger in Ran binding protein and others 279 306 IPR001876 -
Mtr8g2416 316 ProSitePatterns Zinc finger RanBP2-type signature. 9 28 IPR001876 -
Mtr8g2416 316 SUPERFAMILY Ran binding protein zinc finger-like 273 308 IPR036443 -
Mtr8g2416 316 SUPERFAMILY Ran binding protein zinc finger-like 5 33 IPR036443 -
Mtr8g2416 316 ProSiteProfiles Zinc finger RanBP2 type profile. 168 196 IPR001876 -
Mtr8g2416 316 ProSiteProfiles Zinc finger RanBP2 type profile. 48 77 IPR001876 -
Mtr8g2416 316 ProSitePatterns Zinc finger RanBP2-type signature. 283 302 IPR001876 -
Mtr8g2416 316 PANTHER OS04G0110600 PROTEIN 166 226 - -
Mtr8g2416 316 PANTHER OS04G0110600 PROTEIN 265 315 - -
Mtr8g2416 316 PANTHER OS04G0110600 PROTEIN 3 136 - -
Mtr8g2416 316 SUPERFAMILY Ran binding protein zinc finger-like 42 76 IPR036443 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2416 - - lja:Lj4g3v1037490.1 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2416 8 34597263 34600914 Mtr8g2416 8 34597263 34600914 ECH