Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2333 ATGGCATCTATTTTGCCATTCTCAAATGCTCTTGGAAATGCACCGTTTCATCACAAATATCATGCACAAGTCAATTTATCCAAACATGCACCATGTAGACAACAAAGAGTGGAAACAAAGATAATTACTTGCATAAACTTGGATCAAAAGGGAGAGCCACATTCACATAGGCAGACCCAAAATGGAAAAATAAGACGTCAAGAGATTAATGACGTTGTTCCAGGATCATGGGAATCAATGGAAGGGCTAGTTCATTGCAATGCAAATTCTGTTCCTTTGTCACCTATCAACTTCTTGGAGAGAGCAGCAAAGGTTTGTAGAGACAGAACATCACTTGTTTATGGTTCTTTGAAGTATAATTGGGGTCAAACTCATCAACGTTGTCTCAAACTCGCTTCTGCTCTCTCCCAGTTGGGGATTTCTCGTGGAGATAAGGTTGCCACACTAGCACCTAATGTCCCTGCAATGTATGAGCTGCATTTTGCAGTACCAATGGCTGGAGCCATTCTTTGTACTCTTAATTCACGCCTTGATGCAAATATGGTTTCAGTCCTATTGGAGCATTCACAAGCAAAGATTCTATTCGTAGACTATCAACTACTCGAAGTTGCTCGAGGAGCATTGGACCTCCTAGCCAAAAGAGCGAAAAGAAAGCCGATTTTAGTCATGATCATCGACTCTGATTGCACATCTAATATTGACATTACTTCAATTAGTTATGACTATGAAAAACTTATAGCTATTGGACATAATGATTTTGATATTGTGAGGCCACACAGTGAATTAGATCCTATAAGTATAAATTACACCTCTGGCACTACATCTAGGCCTAAAGGAGTTGTCTTCAGTCACAGAGGTGCTTATCTAAACTCTCTCGCAACCGTTCTACTCTTACAAATGACCCTCTTTCCTGTTTATCTTTGGAATGTTCCATTATTTCATGCTAATGGTTGGTGCTTAGCTTGGGGAGTGGCAGCACAGTTTGGAACCAATATTTGTCTAAGGAAAGTCTCTCCAAAGAACATATTTGACAATATAATTAAGCATAAAGTAACATATATGGGAGGAGCTCCTACCGTTTTGAATATGATTGCGAATTCTACATTGGCCGATAGAAAGCTGCTCAATCACAAGGTAGCAGTGATAACTGCAGGTTCCCCTCCACCGCCACAGATCCTTTCGATGATGGAAGAAAATGGTTTTAATATTACTCACATGTATGGCCTCACAGAAACATGTGGTGCAGGAACTTTTTGTGCTTGGAGACCTGAGTGGGACATGTTACCTCCTAAAGAAAAATCAAAGATAAAAGCTAGGCAAGGTGTACCACATGTAGGGTTGGAGGAACTTGATGTCAAAGATCCTTCAACAATGGATAGTGTTCCGGCTGATGGAAAAACGGTTGGTGAGGTAATGTTTAGAGGGAATACAATGATGAGTGGTTATTTTCAAGACTTCAAAGCAACAGAAGAAGCATTCAAAGATGGTTGGTTTCATAGTGGCGATCTTGCTGTGAAACATTCTGATGGTTACATTGAAATCAAAGACCGGTTGAAGGACATAATAGTATCTGGGGGAGAAAACATCAGCTCAATCGAGGTAGAAACGGTTTTGTATAGCCATCCAGCGGTCTTAGAGGCTGCGGTTGTTGCTAGACCTGATGATCTATGGGGCCAAACTCCTTGTGCGTATTTGAAATTAAAAGACGGGTTTGATGCAGATGTTCAAGAAATAATAAACTTTTGTAGAGATCGTTTGCCGCATTTCATGGCTCCAAAAACAGTCATTTTTCAAGATATGCCGAAAACTTCAACAGGTAAGATACAAAAGTTTGTTTTGAGGGAGAAAGCAAAGGCCTTGGGAAGCATTTCTGGACCCCTAGAATGTAAAAGAAAATTTGTTAAGTGCTCAAGTCAGTATGAAGAATAA 1929 0.4012 MASILPFSNALGNAPFHHKYHAQVNLSKHAPCRQQRVETKIITCINLDQKGEPHSHRQTQNGKIRRQEINDVVPGSWESMEGLVHCNANSVPLSPINFLERAAKVCRDRTSLVYGSLKYNWGQTHQRCLKLASALSQLGISRGDKVATLAPNVPAMYELHFAVPMAGAILCTLNSRLDANMVSVLLEHSQAKILFVDYQLLEVARGALDLLAKRAKRKPILVMIIDSDCTSNIDITSISYDYEKLIAIGHNDFDIVRPHSELDPISINYTSGTTSRPKGVVFSHRGAYLNSLATVLLLQMTLFPVYLWNVPLFHANGWCLAWGVAAQFGTNICLRKVSPKNIFDNIIKHKVTYMGGAPTVLNMIANSTLADRKLLNHKVAVITAGSPPPPQILSMMEENGFNITHMYGLTETCGAGTFCAWRPEWDMLPPKEKSKIKARQGVPHVGLEELDVKDPSTMDSVPADGKTVGEVMFRGNTMMSGYFQDFKATEEAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSIEVETVLYSHPAVLEAAVVARPDDLWGQTPCAYLKLKDGFDADVQEIINFCRDRLPHFMAPKTVIFQDMPKTSTGKIQKFVLREKAKALGSISGPLECKRKFVKCSSQYEE* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2333 642 CDD ttLC_FACS_AEE21_like 91 615 - -
Mtr8g2333 642 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 62 623 - -
Mtr8g2333 642 Gene3D - 519 620 IPR045851 -
Mtr8g2333 642 SUPERFAMILY Acetyl-CoA synthetase-like 84 618 - -
Mtr8g2333 642 Gene3D - 82 518 IPR042099 -
Mtr8g2333 642 Pfam AMP-binding enzyme C-terminal domain 533 607 IPR025110 -
Mtr8g2333 642 ProSitePatterns Putative AMP-binding domain signature. 267 278 IPR020845 -
Mtr8g2333 642 Pfam AMP-binding enzyme 100 524 IPR000873 -
Mtr8g2333 642 PANTHER ACYL-ACTIVATING ENZYME 62 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2333 Mtr-Chr8 33801682 33813657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2333 156 624 Miscellaneous Gene Families AT1G20560 61.571 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2333 - - mtr:MTR_8g074120 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2333 8 33801682 33813657 Mtr8g2333 8 33801682 33813657 ECH