Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2291 ATGGAATCGCAACCTGAATCAGCTCGCGGACGACCTAGGCTCTTCATCCAAGAAATGGTGATGCGGAACTTTAAATCTTACGCCGGCGAACAACGCGTTGGTCCCTTTCATAAGAGTTTTTCGGCTGTGGTTGGACCGAATGGAAGTGGGAAGAGTAATGTTATTGATGCTATGTTGTTTGTGTTTGGAAAACGAGCCAAGCAGATGAGATTGAATAAAGTTTCGGAGCTTATACATAATTCTAGCAATCATCAGAATTTGGATAGTGCTGGGGTTTCTGTTCATTTTCAGGAGATTGTTGATTTGGAAGATGGAACATACGAGACTGTTCCTGGAACTGACTTTGTGATTACAAGGGTTGCTTTTCGGGACAACTCCTCTAAGTATTACATTAATAACCGTTCAAGTAACTTCACTGAAGTTACCAAGAAATTGAAGGGAAAAGGTGTTGACCTTGACAATAATAGGTTTCTGATCCTTCAGGGCGAAGTTGAGCAGATTTCACTTATGAAACCAAAATCTCAAGGACCTCATGATGAAGGCTTTCTAGAATATTTGGAAGATATCATTGGGACCAACAAATATGTAGAAAAAATTGATGAGTCATATAAACAGTTAGAATCTCTAAATGAGAGAAGATCCGGTGTGGTGCAAATGGTCAAGCTATCTGAGAAAGAAAGAGACAGCTTGGAGGATGTGAAGAATGAAGCAGAAGCATACATGCTCAAAGAGTTATCTCTGTTGAAATGGCAAGAGAAGGCTACAACGCTAGCTGTTGATGATACAGGGGGAAAAATGGATGAGTTACAAGTGGGTGTTGCTAGCCTGGAAGAAAATCTTAAGGCAGAAAGGGATAAGATCCAAGAAAATAAACAGATTCTGAAAGAGCTTGAAACTAAGCACAACAAGTATATTCAAATACAAGAGGAGCTAGATAATGATATGAGGAAGTGTAAGGAAGAATTCAAGGAGTTTGAGAGGCAGGATGTCAAGTTTCGAGAAGATTATAAGCACATGAATCAGAAGATCAAGAAGCTGGAGGATAAAGCGGAAAAGGATTCATCAAAAATCGAAGCTCTTGTGAAAGAGGGTGAAAACTCAAATGATATGATACCAAAACTTGAGGATAATATCCCTAAACTGCAAAAGTTGTTGACCGATGAGGAGAAGGTCCTCGAAGAAATCACAGAGAGTTCTAAAGTTGAAACTGAGAAATTCCGCTCTGAGCTTGCTAAATTTCGTTCGGAGCTTGAACCTTGGGAAAAAGATTTGATCGAGCACAAGGGAAAGCTTGAGGTTGCATCTAGTGAGGCCAAGCTTCTAAATGAGAAGCATGAAGGTGCTCGTGAAGCCTTTAAAGGTGCTCAAAATCAGATGAAAATTATAACAGAAACAATTAAATCAAAAACTGCAAGCATTTCTCAAATTAAGAGTAATATAGAAAAGAGCAAGTGTGAAGCATCAGAAGCTCACAAAGCGGAAGAAGAATGTATCAAAAAACAAGATGCCCTGATTCCTCTTGAACAAGGTGCTAGACAGAAGGTTGCTGAAATGAAGTCTGTTTTGGATTCAGAGAAGAGCCAGGGATCAGTTCTAAAAGCAGTCATGAAAGCTAAGGAAACCGGACAAATAGAAGGAATATATGGACGGATGGGTGACCTAGGTGCCATTGATGCAAAGTTTGATGTTGCAATATCAACAGCATGTTCTGGGCTTGACTATATTGTCGTGGAAACAACAAATGCAGCACAAGCCTGTGTTGAGTTGCTTCGTAGAGAGAATCTTGGCGTTGCTACTTTCATGATATTGGAGAAGCAAGTTGATCTTCTTCCAATGATGAAAAAGAGTGTAAGCACTCCAGAGGGGGTTCCCCGTCTTTTTGATTTAGTAAAGGTTCGAGATGAAAGAATGAAACTTGCTTTCTTTGCAGCACTTCGAAACACAGTTGTTGCTAAGGATCTTGACCAGGCTTCACGGATAGCATATGGTGGAAACAATGAGTTTCGGCGAGTTGTTACTCTTGGTGGTGCACTTTTTGAAAAATCTGGAACAATGAGTGGTGGGGGAAGTACGCCCAAAGGTGGGAAGATGGGCACATCGATTCGAGCTACAAATGTGTCTGGAGAAGCCGTTGCAAGTGCTGAGAGTGAATTGTCTGGATTGACCGATAAATTGAATAAAATTCGGCAAAGAATGATGGATGCTGTGAAAGTATACCAGGAAGCGGAAAAAAAAATTGCTGCTTGGGAAATGGAGCTGGCTAAAAGCCAGAAGGAGGTTGACAGTTTGAATTCACAGCATAGTTATATTGAAAAACAACTTGGTTCCCTTGAAGTTGCATCAAATCCACAAGAGAACGAGCTTGATCGGTTGAAAGAGCTGATGAAGATTATTTCTGCAGAAGAAAGAGAGATTAATAGACTTACTGACGGATCTAAAAAACTGAAGGAAAAGGTTTCGGAGCTTCAGAAGAAAATAGAGAATGCTGGAGGTGAAAAATTAAAATCTCAGAAGTTGAAGGTCCAGAAAATTCAGTCTGATATTGACAAGGCCAGCTCAGAGATCAACCGTCATAAGGTCCAAATAGAGACGGGCCAAAAGATGATGAAGAAGTTGACTAAGGGAATAGAGGAGTCAAAGAAGGAAAAAGAACGGTTAGCCGAGGAGAGGGAAAAGTTAAAAGGAAACTTCAAAGAAATAGAGCAGAAAGCATTTGCTGTTCAAAAGAATTATGAGAAAACAGAAGAGATGATTAAGAAACATCGGGATGGCTTGGAGGAAGCAAGATCTGAGTATGATAAGATGAAAAAAGCAGTGGACGAATTGCGTGCATCTGAGGTTGATGCTGATTTTAAATTAAAAGACATGAAGAAAGCATACAAAGAATTAGAAATAAAGGGGAAAGGTTACAGGAAAAGACTAGATGAGTTGCAAACTGCTATTTCCAAGCATCTTGAGCAAATTCAGGTAGATTTAGTGGATAATGAAAAGCTACATGCTACATTGACTGAAGAACATCTCAATGCTGCTTGTGACCTGAAAAAGGCCTGTGAAACGGTAGCATTGCTTGAAGCTCAACTGAAAGAGATGAATCCAAATCTTGATTCAATTGCAGAGTATCGCAAGAAGGTAGCATTGTACAATGAGCGAGTTGAAGAACTTAATGCAGTCACTCAGGAGCGAGATGATATAAAGAAGCAACATGATGAATTGAGAAAGAGGAGATTGGATGAGTTTATGGAAGGATTTAATGCCATATCATTAAAGTTAAAGGAAATGTACCAGATGATTACCCTTGGAGGTGATGCAGAACTCGAGCTTGTGGATTCTTTAGATCCTTTCTCTGAAGGCGTTGTATTTAGTGTTAGACCACCAAAGAAAAGCTGGAAAAATATTGCTAACTTATCGGGTGGTGAAAAGACTCTTAGCTCATTGGCTCTTGTATTTGCTCTTCATCATTACAAGCCTACGCCGCTTTATGTAATGGATGAAATTGATGCCGCTTTGGACTTCAAGAATGTATCTATCGTCGGGCATTATGTGAAAGACAGGACTAAGGATGCTCAATTCATAATCATTAGTCTAAGGAACAATATGTTTGAATTGGCTGACCGACTTGTTGGTATTTATAAAACTGATAATTGCACAAAGAGCATCACTATTGATCCGTGCAGTTTTGTCGTTTGCCAGAAGGGTGCATGA 3702 0.3982 MESQPESARGRPRLFIQEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSSNHQNLDSAGVSVHFQEIVDLEDGTYETVPGTDFVITRVAFRDNSSKYYINNRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIIGTNKYVEKIDESYKQLESLNERRSGVVQMVKLSEKERDSLEDVKNEAEAYMLKELSLLKWQEKATTLAVDDTGGKMDELQVGVASLEENLKAERDKIQENKQILKELETKHNKYIQIQEELDNDMRKCKEEFKEFERQDVKFREDYKHMNQKIKKLEDKAEKDSSKIEALVKEGENSNDMIPKLEDNIPKLQKLLTDEEKVLEEITESSKVETEKFRSELAKFRSELEPWEKDLIEHKGKLEVASSEAKLLNEKHEGAREAFKGAQNQMKIITETIKSKTASISQIKSNIEKSKCEASEAHKAEEECIKKQDALIPLEQGARQKVAEMKSVLDSEKSQGSVLKAVMKAKETGQIEGIYGRMGDLGAIDAKFDVAISTACSGLDYIVVETTNAAQACVELLRRENLGVATFMILEKQVDLLPMMKKSVSTPEGVPRLFDLVKVRDERMKLAFFAALRNTVVAKDLDQASRIAYGGNNEFRRVVTLGGALFEKSGTMSGGGSTPKGGKMGTSIRATNVSGEAVASAESELSGLTDKLNKIRQRMMDAVKVYQEAEKKIAAWEMELAKSQKEVDSLNSQHSYIEKQLGSLEVASNPQENELDRLKELMKIISAEEREINRLTDGSKKLKEKVSELQKKIENAGGEKLKSQKLKVQKIQSDIDKASSEINRHKVQIETGQKMMKKLTKGIEESKKEKERLAEEREKLKGNFKEIEQKAFAVQKNYEKTEEMIKKHRDGLEEARSEYDKMKKAVDELRASEVDADFKLKDMKKAYKELEIKGKGYRKRLDELQTAISKHLEQIQVDLVDNEKLHATLTEEHLNAACDLKKACETVALLEAQLKEMNPNLDSIAEYRKKVALYNERVEELNAVTQERDDIKKQHDELRKRRLDEFMEGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITIDPCSFVVCQKGA* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2291 1233 Gene3D - 14 221 IPR027417 -
Mtr8g2291 1233 Gene3D - 508 613 - -
Mtr8g2291 1233 Gene3D - 1047 1225 IPR027417 -
Mtr8g2291 1233 Coils Coil 1037 1074 - -
Mtr8g2291 1233 Gene3D - 614 689 - -
Mtr8g2291 1233 Coils Coil 834 861 - -
Mtr8g2291 1233 Gene3D - 836 996 - -
Mtr8g2291 1233 Gene3D - 708 835 - -
Mtr8g2291 1233 Gene3D - 254 419 - -
Mtr8g2291 1233 Coils Coil 336 363 - -
Mtr8g2291 1233 Pfam RecF/RecN/SMC N terminal domain 15 1217 IPR003395 -
Mtr8g2291 1233 Coils Coil 784 832 - -
Mtr8g2291 1233 CDD ABC_SMC4_euk 14 174 IPR041738 GO:0005524|GO:0016887
Mtr8g2291 1233 SUPERFAMILY Smc hinge domain 511 698 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mtr8g2291 1233 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4 11 1211 - -
Mtr8g2291 1233 Coils Coil 711 766 - -
Mtr8g2291 1233 Coils Coil 266 328 - -
Mtr8g2291 1233 Coils Coil 953 980 - -
Mtr8g2291 1233 PIRSF SMC 13 1230 IPR024704 GO:0005524|GO:0016887
Mtr8g2291 1233 Coils Coil 869 903 - -
Mtr8g2291 1233 Coils Coil 220 243 - -
Mtr8g2291 1233 PANTHER - 11 1211 - -
Mtr8g2291 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 1217 IPR027417 -
Mtr8g2291 1233 Coils Coil 911 945 - -
Mtr8g2291 1233 CDD ABC_SMC4_euk 1125 1219 IPR041738 GO:0005524|GO:0016887
Mtr8g2291 1233 SMART SMC_hinge_2 545 661 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mtr8g2291 1233 SUPERFAMILY Tropomyosin 711 870 - -
Mtr8g2291 1233 Coils Coil 431 458 - -
Mtr8g2291 1233 Pfam SMC proteins Flexible Hinge Domain 545 661 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2291 Mtr-Chr8 33264338 33276807 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2291 K06675 - gmx:100778712 2029.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2291 8 33264338 33276807 Mtr8g2291 8 33264338 33276807 ECH