Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2257 ATGGCTGTGTTGCTGCAAACACATTACACTCTCTCTCTACCTTCACCACGTTACCCTTATCTCTTCTCAATTCGAAACCCTAACTCTAATGTCTACAATTTTCTAATCCCCACCACACCTCTCAAATCTCAATTACAATTCTCCAATCACCGGAATCCAACACACCGTTCGCCGGCGTCACCGGTCTCCGCCTCCCGCCGGGAACCTTCAGAAACGACTTCACTCAAATTGCCCCGTGCTCTTGTCCGCGTCACCGTCTCCATCGCGCTGTTTCTATGCTGTGGCATTCGGGCTTGTTCCGCTTCTTTGCCTCCTCTAACCAACGTGGTTCAGCAGGAACAAACTATTCAAGATGATAATGATGCAAGGAAACATGATGCCAATGAAAATATAGATGTAGATAAGGAATTAGAAGCATCTTTTAATGCTTGGAAGTCTAAAACATATGCATTGACAGTTCCTTTGAAAGTTGTTGCTTTGCGTGGCTCTATTCCTCCTTCATGGATCAAGGACTTCATAAATTCTCAAGGGAATAGAATGAAATTTAAGGTGAAGTATTATGCAACTCTTGAGAGTATCTTCTCTGATCTATCCATTCCCTTTACCAAAGGTGATCATGTCCCAACAACTGCTTTGGCAGCTGATATTGTCGGTATTGGTGACTCGTGGCTCAAATTTGCCGTTGAAAAGGCTATAATTGAGCCAATAAAAGATGTAGAAGGTCAAGAATGGTTTAAAAACTTAGCTGAGAAATGGAAGGTATATCTACGCAGGAACTGTGAGGGAGAAGTGGATCCTGAAGGTGATATATGGGCTGCCCCATATCGATGGGGATGCATGGTAATAGCATACAAGACAAATAGTTTTCAAAAGCATAAGTTGGCTCCAATAGAGGACTGGGCAGATCTTTGGCGGCCTGATCTTGCAGGGAGGATTTCCATGGTGGACTCTCCTAGAGAAGTTGTTGGTGCAGTCTTAAAGTATATGGGGGCTTCCTATAATGCAAATGACATCAATTTGGAAGTTAATGGAGGGAGAGATGCTGTTAAACATAATTTAGCATTGCTTGCAAAACAGGTTCGACTCTTTGATAGTGAAAACTATCTAAAGGCTTTTGGAGTTGGAGATGTGTGGGTAGCTGTTGGATGGAGTAGTGATATTATTCCTGTTGCTAAACGGATGTCTAATGTTGCAGTTATTGTTCCAAAGTCTGGAGCAAGTTTATGGGCTGATCTTTGGGCAATTCCTGCTGCCTCAAAGATTCAAACGAGTCGGATTGGTGGGCGCGTCAGGGGACCATCTCCATTAATCCATCAGTGGATAGAATTTTGTCTGCAATCTGCAAGAGCACTGCCCTTCAAGCAGGAGGTGATCCCAGGTGCCTCTCCCCCTCTTCTTCAAGGTCATTCCACCAATGTGGCCTTGGAGTTAACTAAGGGTAGGCCAAGGCTAGTCACCAATCTCATTGATGGAGCACCACCACCTGACATTTTAGAAAGGTGTGAATTTCTAGAGCCATTATCTAATTCCGCAGTATCCGATTACCACTGGTTGCTTGCCTCAATCCAGGAACCTGGCAATGGATTGATACACAAAATGCGTCAGTATATCTCATCATTGGTTACATATTCTGGGAGGTCTAATTCAAAACTGACTTGA 1659 0.4382 MAVLLQTHYTLSLPSPRYPYLFSIRNPNSNVYNFLIPTTPLKSQLQFSNHRNPTHRSPASPVSASRREPSETTSLKLPRALVRVTVSIALFLCCGIRACSASLPPLTNVVQQEQTIQDDNDARKHDANENIDVDKELEASFNAWKSKTYALTVPLKVVALRGSIPPSWIKDFINSQGNRMKFKVKYYATLESIFSDLSIPFTKGDHVPTTALAADIVGIGDSWLKFAVEKAIIEPIKDVEGQEWFKNLAEKWKVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKHKLAPIEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHNLALLAKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADLWAIPAASKIQTSRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSTNVALELTKGRPRLVTNLIDGAPPPDILERCEFLEPLSNSAVSDYHWLLASIQEPGNGLIHKMRQYISSLVTYSGRSNSKLT* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2257 552 SUPERFAMILY Periplasmic binding protein-like II 155 420 - -
Mtr8g2257 552 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 269 285 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mtr8g2257 552 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 298 312 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mtr8g2257 552 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 316 335 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mtr8g2257 552 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 402 421 IPR001188 GO:0015846|GO:0019808|GO:0042597
Mtr8g2257 552 Gene3D - 163 421 - -
Mtr8g2257 552 CDD PBP2_PotD_PotF_like_1 154 520 - -
Mtr8g2257 552 MobiDBLite consensus disorder prediction 46 71 - -
Mtr8g2257 552 Pfam Bacterial extracellular solute-binding protein 214 449 - -
Mtr8g2257 552 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 71 535 - -
Mtr8g2257 552 Gene3D - 278 409 - -
Mtr8g2257 552 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 71 535 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2257 - - aprc:113857970 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2257 8 32755719 32760107 Mtr8g2257 8 32755719 32760107 ECH