Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2252 ATGCAGAGATTCTCACTTTTCTTCCACAAACACCGCATTTTCAACCTCCCATTAAGAAAATCACTTCAAATTAGACACGAAATTACTACATTACCCCGCATGTTCTTCACCACAACCTCTTCACACTCATCACCACCACCAAACCCTACAAAACCCTCAAAATCCCAAAATGACCAATTTGGCCTCATTCACCTTCGATCTAACACAATCCATTTCAACGATCAAAACAACGATGAATTTGCTTCAGATGTAGAAAAAATATATAGAATTTTAAGAAAATACCATTCTAGGGTTCCAAAATTGGAACTTGCTTTAAAAGAATCTGGTGTTGTTGTTAGATCTGGTTTAACAGAACGTGTTTTGAATCGTTGTGGCGATGCCGGAAATTTAGCTTACAGGTTTTTTTCTTGGGCTTCTAAGCAAACTAGTTATAGGCATAGTCAAGAAGTTTATAAGGCTATGATTAAGGTTTTGAGTAAAATGAGACAATTTGGTGCTGTTTGGGGGTTAATTGATGAAATGAGAGTGGAAAATTCGGAGTTGATTTCGCCACAAGTTTTTGTTATTTTGATGAGGAGATTTGCTTCAGCTAGGATGGTTAGTAAAGCTATTGAGGTTTTAGATGAAATGCCTAAGTATGGTTGTGAGGTTGATGAATACGTTTTTGGGTGTCTTTTGGATGCTTTGTGTAAGAATGGTAGTGTTAAGGAAGCAGCGTCGCTTTTTGAGGATATGAGGTATAAGTTTACACCGACAGTTAAGCATTTTACGTCGTTGTTGTATGGTTGGTGTAAGGAAGGGAAACTTGTGGAGGCAAAACATGTGTTGGTTCAAATGAAGGATGCGGGGATTGAGCCGGATATTGTGGTTTTCAATAATTTGCTTGGTGGGTATGCTCAAGCTGGGAAAATGGGGGATGCTTATGATCTTTTGAAAGAGATGAGAAGGAAGGGGTGTGAACCGAATGCAGCGTCGTATACTGTTTTGATTCAATCATTGTGTAAGCATGAAAAGTTGGAAGAGGCAATGCGGATGTTTGTTGAGATGCAGAGGAGTGGTTGTCAGATGGATGTTATAACGTATACTACATTGATAAGTGGGTTTTGTAAGTGGGGGAAAATCAAAAGGGGTTATGAGCTTTTGGATCAGATGAAACAGGAAGGACATTCCCCAAATCAGCTTACTTATATGCATATCATGGTGGCTCATGAAAAGAAGGAAGAATTGGAGGAGTGTATGGAACTTGTGAATGAGATGCAGAAGATTGGTTGTGTTCCGGATCTTAACATCTATAATATTGTCATTAGGTTGGCTTGCAAGTTGGGAGAGGTCAAGCAAGGGGTTCGGCTTTGGAATGAAATGGAAGCGAGTGGGCTCAATCCAGGTATCGACACCTTTGTCATCATGATTAATGGGTTTCTTGAGCAGGAGTGTCTAGTTGAAGCTTGCGAGTTTTTCAAAGAAATGGTTGGGAGAGGGCTTTTTGCTGCTCCTCAATACGGTACTTTAAAGGAATTGATGAATTCTCTTTTAAGAGCTGAGAAACTTGAAATGGCTAAAGATACTTGGAGTTGTATCACGAGTTCTAAAGGTTGTGAGATGAATGTGGGTGCATGGACAATCTGGATTCATGCATTGTTTTCAAAAGGACATGTGAAGGAGGCTTGTTCGTTTTGCATAGACATGATGGACAACGATTTAATGCCACAGCCAGATACTTTTGCAAAGCTTATGCGTGGTCTGAAGAAATTATACAACAGAGAATTTGCAGTAGAAATCACGGACAAGGTAAGGAAAATGGCTGCTGATAGAAATATCACTTTCAAGATGTATAAACGGAGAGGAGAGAGGGATTTGAAAGAAAAGGTGAAGGAGAAAAAAGACGGGAGGAAGAGGAGGGCTAGACAGCGCCGTTGGGGTGGGGGCAATCAAAAAGAATTATAA 1944 0.3992 MQRFSLFFHKHRIFNLPLRKSLQIRHEITTLPRMFFTTTSSHSSPPPNPTKPSKSQNDQFGLIHLRSNTIHFNDQNNDEFASDVEKIYRILRKYHSRVPKLELALKESGVVVRSGLTERVLNRCGDAGNLAYRFFSWASKQTSYRHSQEVYKAMIKVLSKMRQFGAVWGLIDEMRVENSELISPQVFVILMRRFASARMVSKAIEVLDEMPKYGCEVDEYVFGCLLDALCKNGSVKEAASLFEDMRYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVIRLACKLGEVKQGVRLWNEMEASGLNPGIDTFVIMINGFLEQECLVEACEFFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDTWSCITSSKGCEMNVGAWTIWIHALFSKGHVKEACSFCIDMMDNDLMPQPDTFAKLMRGLKKLYNREFAVEITDKVRKMAADRNITFKMYKRRGERDLKEKVKEKKDGRKRRARQRRWGGGNQKEL* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2252 647 MobiDBLite consensus disorder prediction 619 647 - -
Mtr8g2252 647 Gene3D Tetratricopeptide repeat domain 248 314 IPR011990 GO:0005515
Mtr8g2252 647 Gene3D Tetratricopeptide repeat domain 83 247 IPR011990 GO:0005515
Mtr8g2252 647 Gene3D Tetratricopeptide repeat domain 315 387 IPR011990 GO:0005515
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 322 356 IPR002885 -
Mtr8g2252 647 Coils Coil 402 422 - -
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 248 IPR002885 -
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 392 426 IPR002885 -
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 252 286 IPR002885 -
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 287 321 IPR002885 -
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 357 391 IPR002885 -
Mtr8g2252 647 Gene3D Tetratricopeptide repeat domain 501 647 IPR011990 GO:0005515
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 427 461 IPR002885 -
Mtr8g2252 647 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 41 643 - -
Mtr8g2252 647 Pfam PPR repeat 395 424 IPR002885 -
Mtr8g2252 647 Pfam PPR repeat 256 284 IPR002885 -
Mtr8g2252 647 Pfam PPR repeat 538 565 IPR002885 -
Mtr8g2252 647 Pfam PPR repeat 150 177 IPR002885 -
Mtr8g2252 647 Pfam PPR repeat family 426 473 IPR002885 -
Mtr8g2252 647 Pfam PPR repeat family 286 335 IPR002885 -
Mtr8g2252 647 Gene3D Tetratricopeptide repeat domain 397 500 IPR011990 GO:0005515
Mtr8g2252 647 MobiDBLite consensus disorder prediction 37 57 - -
Mtr8g2252 647 Pfam PPR repeat 214 246 IPR002885 -
Mtr8g2252 647 Pfam PPR repeat 353 385 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 220 246 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 465 494 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 359 392 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 325 358 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 256 288 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 187 219 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 430 461 IPR002885 -
Mtr8g2252 647 TIGRFAM PPR: pentatricopeptide repeat domain 289 323 IPR002885 -
Mtr8g2252 647 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 217 IPR002885 -
Mtr8g2252 647 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 41 643 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2252 267 630 Glycosyltransferase AT1G05670 27.027 4.58e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2252 - - gmx:100781204 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2252 8 32725572 32730858 Mtr8g2252 8 32725572 32730858 ECH