Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2242 ATGAAGAGATACATGACTATAGCAAATTCCGTCAAAACCTTTTTCCGAACTGTTCAATCATCACCCCTTCAACTCCGTTCTATCACCACTCTTCATTCCTTCGTTTCACCTAATAACTTCTTCTATTATGGAAGTTTCAGGTACATTAACTCTGCTCCAACCCACGCCGAAGAAGCTTCTGTTGATAATCGTATTCCAGCTACAATCATTACCGGTTTTCTCGGCTCTGGAAAGACCACTCTTCTGAATCATATTCTCACATCCCAACATGGCAAGCGGATAGCTGTCATTGAAAATGAGTTTGGTGAGGTTGATATTGATGGATCACTGGTTGCTAGCCATTCTTCTGTGAATGGTGAAGACATTATCATGGTCAATAATGGCTGCCTATGCTGCACTGTGCGAGGAGATCTAGTTAAAATGCTGTTGGAGTTGGTTAGGAAGAAAAGAGACAAATTTGATCACATTGTTATTGAAACCACAGGTCTTGCAAAACCAGCCCCTGTTATTGAAACTTTTTTCAGCGATGAACTAGTTTCTGAGTATGTTAAACTGGATGGGGTTGTGACTTTAGTTGACTGCAAGCATGCCATGCAACATTTGAATGAGGTGAAACCAAGATTTGTGGTCAATGAGGCAGTTGAACAAGTTGCATATGCTGACCGAATTATTTTGAACAAGATAGATTTGGTTACTGAATCAGAGTTAAACATGTTGACCAAGAAAATAAAGCACATCAATGGAATGGCACAAATTAAGCAAGCTAAATTTGGATCTGTTGACATAGACTTTGTTCTTGGTGTGGGAGGATATGATATTCAGAGAATTGAAGCTGAGGTAGAAGGAGAATGTCCCTCTACAGCAAGCCATCCAGATGACTGTGGACATGAACACAAAGGGCATCATCATCATGATCACGTGCATGATTCTGCTGTCTCTAGTGTCAGCATTGTTGCGGAGGGAACTCTTGATCGTGATGAGGTTGAAGATTGGCTTGAGAGATTGGTTGAAGAAAAGGGAGAGGACCTATACAGAATGAAAGGTGTCTTGGCAGTGGATGGTTCCGAACAACGATATGTATTTCAGGGGGTGCATTCCATGTTGGATGACAGCCCAGGAAAAACATGGCAACCCAATGAAAAGAGGATAAACAAGCTTGTGTTCATTGGAAGGAATTTGGATGAAACTGCCCTCAGAAAAGGCTTCAAAGGCTGTTTAGTCTAA 1224 0.4134 MKRYMTIANSVKTFFRTVQSSPLQLRSITTLHSFVSPNNFFYYGSFRYINSAPTHAEEASVDNRIPATIITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVNGEDIIMVNNGCLCCTVRGDLVKMLLELVRKKRDKFDHIVIETTGLAKPAPVIETFFSDELVSEYVKLDGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVTESELNMLTKKIKHINGMAQIKQAKFGSVDIDFVLGVGGYDIQRIEAEVEGECPSTASHPDDCGHEHKGHHHHDHVHDSAVSSVSIVAEGTLDRDEVEDWLERLVEEKGEDLYRMKGVLAVDGSEQRYVFQGVHSMLDDSPGKTWQPNEKRINKLVFIGRNLDETALRKGFKGCLV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2242 407 Pfam CobW/HypB/UreG, nucleotide-binding domain 66 252 IPR003495 -
Mtr8g2242 407 Gene3D - 62 271 IPR027417 -
Mtr8g2242 407 SMART CobW_C_3 312 406 IPR011629 -
Mtr8g2242 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 251 IPR027417 -
Mtr8g2242 407 Pfam Cobalamin synthesis protein cobW C-terminal domain 312 406 IPR011629 -
Mtr8g2242 407 Gene3D - 293 406 IPR036627 -
Mtr8g2242 407 MobiDBLite consensus disorder prediction 282 307 - -
Mtr8g2242 407 SUPERFAMILY Hypothetical protein YjiA, C-terminal domain 312 406 - -
Mtr8g2242 407 PANTHER COBW-RELATED 49 407 - -
Mtr8g2242 407 MobiDBLite consensus disorder prediction 290 307 - -
Mtr8g2242 407 PANTHER OSJNBA0083N12.6 PROTEIN 49 407 - -
Mtr8g2242 407 CDD CobW-like 66 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2242 Mtr-Chr8 32631335 32638970 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2242 - - gmx:100788010 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2242 8 32631335 32638970 Mtr8g2242 8 32631335 32638970 ECH