Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2179 ATGGTGCTAGTTGCATTATCCTCTCCCCTCCCAGGTAGGGGGAACCTCTTCTCCTCCTTACCACCCAACAACCCTTCCTCCTCTTCCTCATCCGCCACCCCACGTCCGCCTATCCCCATTCCCAAATATCCCCCACCTCGCAAATCACACCCCCCACCACCACCAAACCCAAATCCCGCCCTCAAACACCACCGCAACTCCAAATACTACAAACCCATCACCCACCCCACCACCATCCCTTCCTCCGACGACCGCTCCGTCATCATCGGCGAGTCCGGCGTCTCCTACCTTCTCCCTGGAGCTCCCTTCGAGTTTCAGTTCAGTTACTCCGAAACTCCAAAAGTAAAACCAATTGCTATCCGTGAACCTGCTTTCTTACCGTTTGAACCTCCCACAATGCCGAGGCCGTGGACAGGGAAAGCACCGTTGAAGAAGTCGAAGAAGAATATTCCGCTGTTTGATTCGTTTAATCCTCCTCCGGAAGGGATGAAAGGTGTCAAGAAAGTTGAAATGCCGGGGCCGTTTCCGGTTGGGAAGTTTCCTGAAGAAGGGGTGAGTAGAGAGGAGATACTTGGTGAGCCGCTTAAGAAGTGGGAGGTGCAGATGCTTGTTAAGCCTATGATGGCCGATAATCGCCAAGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTGATACATTCACATTGGAAGCGACGTCGCGTCTGCAAAATTCGTTGTAAAGGTGTTCCTACCGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAGCAGGGGGGAAAATAATTCATCGAGCTGGCGGTGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTACCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTATCCAAAACTTATACAAGATGCTCCAGAAGGATTAACGAAAGCTGAAGCAGATGAATTAAGGATGAAAGGGAAAAGCTTGTTGCCAATATGTAAATTAGCCAAAAATGGAGTATATACAACACTTGTAAAGGATGTCAGAGATGCTTTTGAAGGAAGCCATTTGGTGAAGATTGATTGCAAGGGATTGGATCCCAGTGATTATAAGAAATTAGGTGCCAAGCTTAAGGATTTAGTTCCTTGTGTGCTACTGTCTTTCGATGATGAACAAGTACTGATTTGGAGGGGAAAAGGTTGGAAATCAATGTACCCTCAAGCTCCAGTTTTTCCTCCTGCTGAAGCTACCATTACAAGGGATTTAGAAAATAAAGGCGAGGTGGATGATAATCAATCTAAGCACATCAGTGAAATGGTCAGCATAAGCCCAAAAATGTTATCTCTGTGGAGGAGTGCAATTGAGTCAAACAAAGCCTTATTGCTAGAAGAATTTAATATTGGTCCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAGGGTATTTCACATGCCATAGAGCACTCCTATCCAGCATTTACTTCTTCAAGTGACGATGCTTTTGAACGTTCAAATGTATACCTTCAAGATGGTACAGAAAACAACTATTCAAGTGATGGCGTAGATGATGTCGATGATTATGATAATAACAGTGACGACGAAGATGATTATGATTACTACAATGACGAAGACGATGAGTTTAATGATATGGTGGATACATCAGCTGAACCTGGATCGTTACCAGTTGATTTACTTGTTGATAAGCTCAAACTAAGACAAAAGGAGTAA 1725 0.4481 MVLVALSSPLPGRGNLFSSLPPNNPSSSSSSATPRPPIPIPKYPPPRKSHPPPPPNPNPALKHHRNSKYYKPITHPTTIPSSDDRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPIAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPEGMKGVKKVEMPGPFPVGKFPEEGVSREEILGEPLKKWEVQMLVKPMMADNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRAGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADELRMKGKSLLPICKLAKNGVYTTLVKDVRDAFEGSHLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQVLIWRGKGWKSMYPQAPVFPPAEATITRDLENKGEVDDNQSKHISEMVSISPKMLSLWRSAIESNKALLLEEFNIGPDALLEKVEEFEGISHAIEHSYPAFTSSSDDAFERSNVYLQDGTENNYSSDGVDDVDDYDNNSDDEDDYDYYNDEDDEFNDMVDTSAEPGSLPVDLLVDKLKLRQKE* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2179 574 SUPERFAMILY YhbY-like 313 404 IPR035920 -
Mtr8g2179 574 MobiDBLite consensus disorder prediction 32 60 - -
Mtr8g2179 574 SMART CRS1_YhbY_2 313 396 IPR001890 GO:0003723
Mtr8g2179 574 SMART CRS1_YhbY_2 195 278 IPR001890 GO:0003723
Mtr8g2179 574 Gene3D - 194 290 IPR035920 -
Mtr8g2179 574 SUPERFAMILY YhbY-like 194 288 IPR035920 -
Mtr8g2179 574 MobiDBLite consensus disorder prediction 12 31 - -
Mtr8g2179 574 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 10 569 - -
Mtr8g2179 574 ProSiteProfiles CRM domain profile. 311 407 IPR001890 GO:0003723
Mtr8g2179 574 Pfam CRS1 / YhbY (CRM) domain 198 278 IPR001890 GO:0003723
Mtr8g2179 574 Pfam CRS1 / YhbY (CRM) domain 313 396 IPR001890 GO:0003723
Mtr8g2179 574 MobiDBLite consensus disorder prediction 518 550 - -
Mtr8g2179 574 MobiDBLite consensus disorder prediction 1 64 - -
Mtr8g2179 574 MobiDBLite consensus disorder prediction 509 558 - -
Mtr8g2179 574 Gene3D - 313 407 IPR035920 -
Mtr8g2179 574 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 10 569 IPR044599 GO:0000373
Mtr8g2179 574 ProSiteProfiles CRM domain profile. 193 289 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2179 Mtr-Chr8 31935895 31942718 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2179 - - gmx:100801953 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2179 8 31935895 31942718 Mtr8g2179 8 31935895 31942718 ECH