Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2175 ATGGATTCAAATAGATTCTCATTCTCAGAACCATTTCTAAAAACTAGAAGAAAATTATTTTCTGAATTTAGTTTATGTGTTGGTGCTTCTTTGCTTTTATGTTCTCTTTTTTTCCTTAGTAATTCCCTCAAAGTTCCTAAAAATTCAGTCTTTCTTCCAGTTTTCAACAATTCTAACACTAATTCTTCTTTTGTTTCACACCCCTTTTCTTTTAATAGTACTAATCACTCTTGTGTTTATTTGAACAATGCTTCTGAGATTTCTCTTAAGAGAATTGAAGAAGAAAGTGTTATTGTTGGTAGAATTAGTGAAGTAAATGTGTCAAGTGTTGGAGTTGAAAAGAAAAATTCTAGTTTTGTAAGTCCTAATGTGAAGAACAATGTGAATGTGACCAATGATGCTTCATACAATGGAAATACTAGTATTGTAGAGGGAAGGAATGAAGATTTGGTTAGGGATAAGAATGTAACTTTAATCACTCATAGTGATGAGCAAGTGGAGAAAATGAATGTTGGTAATTTATATGATAAATGTGATATCTTTGATGGAAAGTGGGTAAGAGATGATTCAAAGCCATATTATCCTTTAGGTTCTTGTCCCTTCATTGATAGAGATTTTAATTGTCATCTTAATGGGAGGCTTGATCTTGAATATGTAAAATGGAAGTGGAAGCCAAATAAATGTCACATTCCAAGTTTGAATGCAACTGATTTTCTCGAGAGGTTGCGCGGGCAGAGGCTGGTTTTTGTCGGAGATTCATTGAACAGGAATATGTGGGAGTCCCTTGTTTGTATCCTTCGACAAAGCCTCCGGTACAAGAAACGTGTTTTTGAAATTTCAGGGAAAAGGGAGTTTAAAAAGAAAGGTGTCTATGCTTTTAGATTTGAGGATTACAATTGTTCAGTGGATTTTGTTGCTTCACCATTCCTTGTTAGAGAATCAACTTTCAAAGGAAAAAATGGTTCATTTGAGACATTAAGATTGGATTTGATGGATCACACAACTTCAAGGTATCAGGATGCTAATATTATAGTCTTCAATACAGGCCATTGGTGGACACATGAGAAAACATCAAAAGGAGAAGAATATTATCAAGAAGGAAACCATGTATATCCAAGACTCAAAGCTTTGGATGCTTATATGAGGGCTTTGACCACATGGGCTAAATGGGTTGATCGAAAAATTAACGCCAATCATACGCAGGTTTTCTTCAGAGGATACTCAGTTACTCATTTCTGGGGTGGACAATGGAATTCAGGTGGACAGTGCCACAAAGAAACCGAGCCAATATATAATGAAACTTACTTACAAAAGCATCCTTCAAAAATGCGAGCGCTAGAGCATGTCATCCAAAATATGAAAACCGAAGTCATATATATGAACATAAGTAGACTTACAGATTACAGAAAAGACGGACATCCTTCAGTATACCGAAAAGATTACAAGACATCAATGAAGCAGAACTCTTCTTCGCTATACGAAGATTGCAGCCATTGGTGTTTGCCTGGAGTACCAGATACTTGGAATGAATTGTTATATGTTTCTCTCTTAAAATATGGAAAGGGAACTTGGAAAATCTGA 1581 0.3523 MDSNRFSFSEPFLKTRRKLFSEFSLCVGASLLLCSLFFLSNSLKVPKNSVFLPVFNNSNTNSSFVSHPFSFNSTNHSCVYLNNASEISLKRIEEESVIVGRISEVNVSSVGVEKKNSSFVSPNVKNNVNVTNDASYNGNTSIVEGRNEDLVRDKNVTLITHSDEQVEKMNVGNLYDKCDIFDGKWVRDDSKPYYPLGSCPFIDRDFNCHLNGRLDLEYVKWKWKPNKCHIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLVCILRQSLRYKKRVFEISGKREFKKKGVYAFRFEDYNCSVDFVASPFLVRESTFKGKNGSFETLRLDLMDHTTSRYQDANIIVFNTGHWWTHEKTSKGEEYYQEGNHVYPRLKALDAYMRALTTWAKWVDRKINANHTQVFFRGYSVTHFWGGQWNSGGQCHKETEPIYNETYLQKHPSKMRALEHVIQNMKTEVIYMNISRLTDYRKDGHPSVYRKDYKTSMKQNSSSLYEDCSHWCLPGVPDTWNELLYVSLLKYGKGTWKI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2175 526 Pfam PMR5 N terminal Domain 177 229 IPR025846 -
Mtr8g2175 526 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 230 513 IPR026057 GO:0016740
Mtr8g2175 526 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 10 524 - -
Mtr8g2175 526 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 524 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2175 Mtr-Chr8 31907976 31911080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2175 - - gmx:100798751 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2175 8 31907976 31911080 Mtr8g2175 8 31907976 31911080 ECH
Mtr5g1385 5 14495098 14499922 Mtr8g2175 8 31907976 31911080 PCT