Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2139 ATGAAGTTTATGAAACTAGGATCTCGTCCTGATATCTTCTACACTAAAGACTCAGTCAGGTCAGTTTCTTCTGAAGTTTCAAGTGATCTTATAATTCAAGTGAAAGGAACTAGATATCTTCTTCACAAGTTTCCACTCCTATCAAAATGTTTGCATCTACAAAGATTATGTTTGGAGTCACTAGATTCAGGAAATCATCAAATAGTACAACTCCCCGATTTTCCTGGCGGAGAAGAAGCATTTGAACTCTGCGCAAAATTCTGCTATGGAATCACAATCACTCTAAGTGCTTACAACATTGTATCCACAAGATGTGCCGCGGAATATTTACAAATGACAGAAGATGCAGAAAAGGGTAACTTGATTTACAAGCTTGAAGTTTTTTTCAATTCATGCATACTTCGCGGTTGGAAAGATTCAGTTGTGACACTACAAACCACAAAAGCATTGTCTTTATGGTCAGAGGAATTGTCAATTACAAATAGATGCATCGAAGCAATTTGCTCGAAGGTCTTAAAGAGGGTTAGAAATGAAGATGATATATCTTGTAGTGGAACAGAAAGTTTGAGAGATAAATCAGTAAGAAAAGGATGGTGGGGTGAAGATTTAGCTGAATTGAAAATTGATCTTTATTGGAGAATCATGATTGCTTTAAAATCTGATGGAAAAATGCCTTTAAATCTCATCGGTGATGCGTTGAAAATTTATGCTTCTAGATGGCTACCAAAAACCGGTTCCGATTCTGATTCAAGAAGTGAAATAGCATCAAAGTACAGTTTGCTTTTAGAATCAATAGTGAATTTGCTTCCAGCTGCAAAAGGTGTTGTTTCTTGTAGCTTCCTTCTTAAGCTTTTGAAAGTTGCCAATGATTTGAAAGTTTTTTCGTCTTTAAAGATCGAATTGGTTAAAAGGGTTGGACTTCAATTCGAGGAAGTAACAGTGAATGATCTTATAATGGTTTGTGATGTTGATTTGGTGATGAACATATTGGAAGAGTTTATGTTGCAAATAAGTCAAAGTCCACCAACTAGTCCTCAAAGATCAAGGTTCGCTTTTGAACGGAGAAGGTCACGTTCGGCTGAGAATGTTGATTTTGAATTGCAAGAGAGTAGAAGATCTTCTTCAGTTTCACATAGCTCAAAGTTGAAGGTGGCTAAGCTTGTTGATAAGTATCTTCAAGAGGTTGCTAAGGATGTGAATTTGCCTCTGGATAAGTTTGTTGCTATTGCTGAAACTGTACCTGAATTTGCAAGATGTGATCATGATGATCTATACAGTGCTATTGATACTTATCTCAAGGCTCATCCAGAACTCGACAAAACCGAAAGGAAAAGACTATGTAGAATTCTAGACTGCAAAAAACTCTCCATTTCATCATGTATGCATGCTGCACAGAACGAGCTACTTCCACTAAGACTTGTTGTCCAAGTTCTCTTCTTTGAGCAAGCTAGAGCTGCATCATCTGGTGGCAAAGTCACCAACATATCAAGCAACATCAAAGCATTACTCACTTCTTATGGAATTGATCCATCAAAACATGCAGCACAATTAAGCACAAGTACAAGTATACATGCTAGTGATAATTGGAGTGTTAATGGATTGAACTCACCAAAGAACACAACTCTTAGGATGAAACTAGCTGAGGATGATTTTGATGAGAATAATGATGTGGAAATCAATGGAATTGGTAGAAGTTCTAGATTTAAAAGTTTTTGTTCACTTCCTACTAAACCTAAAAGAATGTTTAGTAAGTTGTGGTCTACCAATAGAAGCACAACTCAAAAGAATTGA 1791 0.3652 MKFMKLGSRPDIFYTKDSVRSVSSEVSSDLIIQVKGTRYLLHKFPLLSKCLHLQRLCLESLDSGNHQIVQLPDFPGGEEAFELCAKFCYGITITLSAYNIVSTRCAAEYLQMTEDAEKGNLIYKLEVFFNSCILRGWKDSVVTLQTTKALSLWSEELSITNRCIEAICSKVLKRVRNEDDISCSGTESLRDKSVRKGWWGEDLAELKIDLYWRIMIALKSDGKMPLNLIGDALKIYASRWLPKTGSDSDSRSEIASKYSLLLESIVNLLPAAKGVVSCSFLLKLLKVANDLKVFSSLKIELVKRVGLQFEEVTVNDLIMVCDVDLVMNILEEFMLQISQSPPTSPQRSRFAFERRRSRSAENVDFELQESRRSSSVSHSSKLKVAKLVDKYLQEVAKDVNLPLDKFVAIAETVPEFARCDHDDLYSAIDTYLKAHPELDKTERKRLCRILDCKKLSISSCMHAAQNELLPLRLVVQVLFFEQARAASSGGKVTNISSNIKALLTSYGIDPSKHAAQLSTSTSIHASDNWSVNGLNSPKNTTLRMKLAEDDFDENNDVEINGIGRSSRFKSFCSLPTKPKRMFSKLWSTNRSTTQKN* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2139 596 Pfam NPH3 family 198 460 IPR027356 -
Mtr8g2139 596 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 592 - -
Mtr8g2139 596 ProSiteProfiles NPH3 domain profile. 197 484 IPR027356 -
Mtr8g2139 596 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Mtr8g2139 596 SUPERFAMILY POZ domain 20 114 IPR011333 -
Mtr8g2139 596 PANTHER OS12G0117600 PROTEIN 1 592 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2139 Mtr-Chr8 31461709 31464963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2139 26 490 EF-hand Containing Proteins AT3G44820 33.658 4.57e-80 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2139 - - gmx:100798413 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2139 8 31461709 31464963 Mtr8g2139 8 31461709 31464963 ECH