Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2009 ATGGGATCTGAAGGGCCAAAGAAAATTACAATTCATGTAACTGGGTTTAAGAAGTTTCAAGGAGTGCCAATAAACCCTACAGAGATTATTGTTAATAATCTGAGGGATTATGTTGAAAAGAAAGGTTTTCCAGCTGGTGTTACTCTTGGAAGTTGCACTATTCTTGAAGTGGCTGGTGATGATGCACTTCCTCAGCTTTATCAGACCATGGAATCTGTTGTATCGAAAACGGATACAGAGAGTAATGCAAATCTTGTGTGGCTTCACTTGGGGGTGAATAGTGGAGCTGCAAGGTTTGCAATTGAGCGGCTGGCAGCGAATGAAGCTACTTTCCGCTGTTCTGATGAATTAGGATGGCAACCACAACAAGTACCAATAGTCCTTGAGGATGGGGGAATTTCTCGAACAAGAGAGACTTCTCTACCCGTTGATGCAATCTTGAAATTCTTGAAAAAGGGAAAAGATTATGATGTGATGATATCAAACGACGCAGGACGATTTGTTTGCAATTATGTGTATTACCACTCTCTTCGGTTCGCAGAACAGAAGGGTAACAAGTCTCTATTTGTTCATGTCCCCTTATTTTCAAGAATCGATGAAGAAACTCAGATGAGATTTACATCCTCTCTTTTGGAGGCCATTGCTTCTGCATGTTAA 657 0.4094 MGSEGPKKITIHVTGFKKFQGVPINPTEIIVNNLRDYVEKKGFPAGVTLGSCTILEVAGDDALPQLYQTMESVVSKTDTESNANLVWLHLGVNSGAARFAIERLAANEATFRCSDELGWQPQQVPIVLEDGGISRTRETSLPVDAILKFLKKGKDYDVMISNDAGRFVCNYVYYHSLRFAEQKGNKSLFVHVPLFSRIDEETQMRFTSSLLEAIASAC* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2009 218 Pfam Pyroglutamyl peptidase 11 196 IPR016125 -
Mtr8g2009 218 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 8 215 IPR036440 -
Mtr8g2009 218 PANTHER BNAA09G15240D PROTEIN 1 217 - -
Mtr8g2009 218 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 217 IPR016125 -
Mtr8g2009 218 Gene3D - 7 218 IPR036440 -
Mtr8g2009 218 CDD Peptidase_C15 9 216 IPR000816 GO:0005829|GO:0006508|GO:0016920
Mtr8g2009 218 PIRSF Pyrrolidone-crbxlat_pptds 8 218 IPR000816 GO:0005829|GO:0006508|GO:0016920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2009 Mtr-Chr8 29898033 29901527 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2009 K01304 - gmx:100784344 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2009 8 29898033 29901527 Mtr8g2009 8 29898033 29901527 ECH