Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2000 ATGGATCAAAGAGAGTTTGAAATTCAACCAAATTCTGATCCTAATCCATCAACAACTCATGTTTATCATCTTGCTTTGGATATTGGAGGATCTCTTAATAAATTAGTATACTTCACAAAAGATGATGATCATTTTGTGGACGGTGAGGCGGAGATTTCTCCTAGAAATACTTCAGAGAAATCCAAAGGCAGTAGGAGGAACCATCCTGTTCTTAAAGGAAAGCTCAATTTTAAGAAGTTTGAAACAAGCAAGATAGATGATTGTATAGATTTTATCAAGACCATGAAACTTCATCCTGGAGGTAGTCGGCAGCAAGAAAATCCTGGAAGTCAACCAATATCTATTAAGGCCACAGGTGGTGGTTCATACAAATATGCAGACCCCTTCAAAGAAAGGCTAGGGATAAATCTTGACAAGGAAGATGAAATGGATTGTCTTGTTGCAGGAGCAAATTTTCTTCTCGAGGTAGTCGACCGAGAAGCCTATACCTATATGGGTGATCAAAGGCAATTTGTGCAGATAGATCAAAATGATTTGTATCCATATCTTCTTGTTAATATTGGATCTGGTGTTAGCATGATCAAGGTGGAAGGAAATGGAAAATTCGAGCGAGTTAGTGGAACGAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGAAAGCTTTTAACTCAATGCAAGAGCTTTGATGAGTTGCTGGAATTAAGTTATCAGGGCAACAACAAAGAGGTAGATATGCTTGTCGGAGATATTTATGGTGGAATGGATTATGCAAAGATTGGTCTTTCATCTACTGCAATAGCATCTAGTTTTGGAAAGGCAATGTCTGATAAAAAGGAGCGAGAAGATTACAGACCCGAAGATATGGCTCGATCTCTTCTAAGAATGATTTCAAATAATATTGGACAGATCTCTTACTTAAATGCCCTTCGTTTTGGGCTGAAGAGGATATTTTTTGGTGGATTTTTTATTCAGAGGCATCCTTTTACAATGGATACACTATCTGTTGCTGTTAATTTCTGGTCTAAAGGTGAGGCGAAAGCAATGTTCTTGCGGCATGAAGGGTTTCTTGGAGCTGTAGGTGCCTTCATGAGTTCTGATAAACATGGCCTCAAAGAATTATTGGTCAAGCAAGAAGCCCAACAAAGTCCGACCAAATTATCTTTCGCTGTTGATAAGATGAATGGTCAACTAGATGGTGAATTAATTGGTGATGAAAGTATTGAGTGTAGTGTGTATGCGGCTTAG 1245 0.3871 MDQREFEIQPNSDPNPSTTHVYHLALDIGGSLNKLVYFTKDDDHFVDGEAEISPRNTSEKSKGSRRNHPVLKGKLNFKKFETSKIDDCIDFIKTMKLHPGGSRQQENPGSQPISIKATGGGSYKYADPFKERLGINLDKEDEMDCLVAGANFLLEVVDREAYTYMGDQRQFVQIDQNDLYPYLLVNIGSGVSMIKVEGNGKFERVSGTSIGGGTFWGLGKLLTQCKSFDELLELSYQGNNKEVDMLVGDIYGGMDYAKIGLSSTAIASSFGKAMSDKKEREDYRPEDMARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIQRHPFTMDTLSVAVNFWSKGEAKAMFLRHEGFLGAVGAFMSSDKHGLKELLVKQEAQQSPTKLSFAVDKMNGQLDGELIGDESIECSVYAA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2000 414 MobiDBLite consensus disorder prediction 100 117 - -
Mtr8g2000 414 SUPERFAMILY Actin-like ATPase domain 22 158 IPR043129 -
Mtr8g2000 414 MobiDBLite consensus disorder prediction 99 119 - -
Mtr8g2000 414 Gene3D - 16 172 - -
Mtr8g2000 414 SUPERFAMILY Actin-like ATPase domain 132 363 IPR043129 -
Mtr8g2000 414 MobiDBLite consensus disorder prediction 49 69 - -
Mtr8g2000 414 Gene3D - 240 354 - -
Mtr8g2000 414 PANTHER PANTOTHENATE KINASE 2 414 IPR004567 GO:0004594|GO:0005524|GO:0015937
Mtr8g2000 414 PANTHER PANTOTHENATE KINASE 2 414 - -
Mtr8g2000 414 TIGRFAM panK_eukar: pantothenate kinase 23 364 IPR004567 GO:0004594|GO:0005524|GO:0015937
Mtr8g2000 414 MobiDBLite consensus disorder prediction 49 66 - -
Mtr8g2000 414 Pfam Fumble 23 363 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2000 Mtr-Chr8 29778684 29784620 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2000 K09680 - gmx:100808162 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2000 8 29778684 29784620 Mtr8g2000 8 29778684 29784620 ECH