Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1999 ATGGCAGATTCTGTTGTTAATGTCACTCACGATGTTCACTCTCTCCTCTCTTCTCCAGATAGAGACTTTCTTCTTCGCAACACCGGCGATCAGGTAAAAATTGATAGCTTGAAGGGAAAGAAACTTGGTTTTTATTTTTCAGCATCATGGTGTGGTCCGTGTCGATCATTCACTCCAACGTTGGTGGAGGTGTACAATGAACTCTCTCCCAAGGGTGACTTTGAGGTTGTTTATGTCTCACGTGATAAAGATGATGAGACCTTTAACAACTACTTTTCCAAGATGCCATGGCTGGCTATCCCATTTTCTGACTCAGAGATACGCATTCGCCTCAAAGAATTGTTTCATGTAAAAGGCATTCCTCATCTTGCATTGCTCGATGATACTGGAAAAGTTGTTACTGAAGACGGAGTTCACATTATCCGTGAATATGGAACTGAAGGATACCCTTTCACATCAAAAAAGGTTCAAGAGTTGAAAGATATAGAAGAGGAAGCTATGAGGAACCAGTCCTTGAGATCGACATTGGTCTCTAGCTACCGTGACTTTGTGATATCATCCGATAGAAACGAAATACCTATCTCTGAGATTGAGGGAAAGACAGTTGGTTTGCATTTCTTTACGACTTCATACAAACCATGCGTGCTATTTAATCAAAAGCTTAAGGAGGTTTACAACAACCTGAAGGAAAATGGGGAGAACTTTGAGGTCGTGTTTATACCCTTAGATGATGAGGAAGAGTCATTCAAGAAAGAATTAGAAAGCGTGCCTTGGTTATCCTTGCCTCTCAAGGACAAAACTTGTTTGAAACTAGTTAAGTACTTTGAGCTATCAACACTCCCCTCCTTTGTTGTTATTGGGCCAGATGGGAAAACTCTTCATCCTAATGCCGCTGATGCCATTGAGGATCATGGGATAGACGCATATCCATTCACTCCTGAAAAGTTTTCTGAACTCGATGAAATAGCAAAGGCCAAGGAGGCATCTCAAACACTTGAGTCGGTTTTGGTGTCTGGCGATCAAGATTTTGTCATTGAGAAAGATGGGAAGAAGATTCCGGTGTCGGAATTAAAGGGGAAGACTGTCCTCCTCTACTTCTCAGCCCACTGGTGTCCTCCATGCCGTGAGTTTCTTCCAAAACTCATTGATGCATACCTTAAGATCAAGACAGAAGACAATGATGCACTTGAAGTGGTTTTCATCTCTAGTGATAGGGATCAAGACTCCTTTGATGAATTCTTTGCGGAAATGCCATGGGTGGCACTTCCCTTTGGTGACTCGAGAAAAGAATTTCTAAGTCGCAAATTCAAGGTAGCTGGCATTCCTAAGCTGGTGGCGATCGGACCAAGTGGCCAGACTGTCACGAAAGAGGCTCGAGATCTGGTTGGGATTTATGGGGCAGATGCTTATCCTTTCACTGAGGAGAGAATAAAAGAAATAGAGGCACAAAAAGCTGCCAAGGAAGAAGAGAAGCCCAAAGATGGATGGGTTTGTGATGGAGATGTCTGCACCAAAGCCTGA 1521 0.43 MADSVVNVTHDVHSLLSSPDRDFLLRNTGDQVKIDSLKGKKLGFYFSASWCGPCRSFTPTLVEVYNELSPKGDFEVVYVSRDKDDETFNNYFSKMPWLAIPFSDSEIRIRLKELFHVKGIPHLALLDDTGKVVTEDGVHIIREYGTEGYPFTSKKVQELKDIEEEAMRNQSLRSTLVSSYRDFVISSDRNEIPISEIEGKTVGLHFFTTSYKPCVLFNQKLKEVYNNLKENGENFEVVFIPLDDEEESFKKELESVPWLSLPLKDKTCLKLVKYFELSTLPSFVVIGPDGKTLHPNAADAIEDHGIDAYPFTPEKFSELDEIAKAKEASQTLESVLVSGDQDFVIEKDGKKIPVSELKGKTVLLYFSAHWCPPCREFLPKLIDAYLKIKTEDNDALEVVFISSDRDQDSFDEFFAEMPWVALPFGDSRKEFLSRKFKVAGIPKLVAIGPSGQTVTKEARDLVGIYGADAYPFTEERIKEIEAQKAAKEEEKPKDGWVCDGDVCTKA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1999 506 PANTHER NUCLEOREDOXIN 1-2-RELATED 5 488 - -
Mtr8g1999 506 SUPERFAMILY Thioredoxin-like 346 455 IPR036249 -
Mtr8g1999 506 CDD TryX_like_TryX_NRX 342 472 IPR045870 GO:0004791
Mtr8g1999 506 Gene3D Glutaredoxin 332 473 - -
Mtr8g1999 506 Gene3D Glutaredoxin 175 312 - -
Mtr8g1999 506 Gene3D Glutaredoxin 16 153 - -
Mtr8g1999 506 CDD TryX_like_TryX_NRX 22 151 IPR045870 GO:0004791
Mtr8g1999 506 SUPERFAMILY Thioredoxin-like 26 133 IPR036249 -
Mtr8g1999 506 SUPERFAMILY Thioredoxin-like 185 293 IPR036249 -
Mtr8g1999 506 Coils Coil 470 490 - -
Mtr8g1999 506 Pfam Thioredoxin-like 199 291 IPR012336 -
Mtr8g1999 506 Pfam Thioredoxin-like 40 132 IPR012336 -
Mtr8g1999 506 Pfam Thioredoxin-like 359 452 IPR012336 -
Mtr8g1999 506 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Mtr8g1999 506 ProSiteProfiles Thioredoxin domain profile. 14 168 IPR013766 -
Mtr8g1999 506 PANTHER THIOREDOXIN 5 488 - -
Mtr8g1999 506 ProSiteProfiles Thioredoxin domain profile. 319 482 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1999 Mtr-Chr8 29776098 29778240 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1999 K17609 - gmx:100809224 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1999 8 29776098 29778240 Mtr8g1999 8 29776098 29778240 ECH