Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1996 ATGGCGGATTCTGTTGCTGATGTCACTCACAACGTTCACTCTATTCTCTCTTCTTCCGATAGAGACTTTCTTCTTCGAAACACCGGCGATCAGGTTAAAATTGATAGCTTGAAGGGAAAGAAACTTGGTTTCTATTTTTCAGCATCATGGTGTGGTCCGTGTCGAGGATTCACTCCAAAGTTGGTGGAGGTGTACGATGAACTCTCTCCAAATGGTGAATTTGAGGTTGTTTTTGTCTCAGCCGATAAAGATGATGAGGCTTTTAAGAGCTACTTTTCCAAGATGCCATGGCTAGCTATCCCATTTTCTGATTCAGAGACACGCGGTCGCCTTGATGAATTGTTTCATGTCAACGGAATTCCTCATCTTGCATTGCTTGATGAAGCTGGAAAAGTTATTACTGAAGATGGAGTTGACATTATCCGTGTTTATGGAGCTGAAGCATACCCTTTCACATCAAAAAGGGTTCAAGAGTTGAAAGATATAGAAGAGGAAGCTAAGAGGAACCAGTCCTTGAGATCGATATTGGCCTCTCGTTCCCGTGACTTTCTGATATCATCCGATGGAAATGAAATACCTATCTCTGAGCTTGAGGGAAAGACAGTTGGTTTGCATTTCTGTGCGACTTCATACAGAGCATGCACGCTATTTACTCAAAAGCTTAAGGAGGTTTACAAGAAGCTGAAGGAAAATGGGGAGAACTTTGAGGTCGTGTTTATACCTTTAGATGATGAGGAAGATGCATTCAAGAAAGAATTAGAAAGTGCGCCTTGGTTATCCTTGCCTCTCAAGGACAAAACCTGTGCGAAATTAATTCAGTACTTTGAGCTATCAGAACTCCCCACCTTGGTTATTATTGGGCCAGATGGGAAAACTCTTCATCCTAATGCCGCTGAGGCCATTGAGGATCATGGGGTTGATGCGTATCCATTCACTCCTGAAAAGTTTTCTGAACTCGATGAAATAGCAAAGGCCAAGGAGGCATCTCAAACACTTGAGTCCGTTTTGGTGTCTGGCGATCAAGATTTTGTCATTGACAAAGACGGGAAGAAGATTCCGGTATCAGAATTAGTGGGGAAAACTGTCCTCCTCTACTTCTCAGCCCACTGGTGTCCTCCATGCCGTGCGTTTCTTCCAAAACTCATTGAGGCATACCATAAGATTAAGGCACAAAACAATGATGCACTTGAAGTGGTTTTCATCTCAAGTGACAGGGATCAAGAATCGTTTAATGAATTCTTTGCGGGAATGCCATGGCTGGCACTTCCCTTTGGTGACACGAGAAAAGAATTCTTGAGTCGCAAATTCAAGGTATCTGGCATCCCCAAGCTCGTGGCGATTGGACCAAGTGGCCAGACTGTCACGAAAGAAGCTCGGGGTCTGGTTGGGCTTTATGGGGCAGATGCTTATCCTTTCACTGAAAAGAGAATAAAAGAAATAGAGGCACAAAAGGATGACATTGCAAAGGGGTGGCCTGAGAAGGTGACGCATGAAACACATGAGCACGAGCTTGTATTGTCGCGCCGCAATGTTTATTGCTGCGATGGTTGCAAGGATGAGGGAGATACTTGGTCATACTTATGTGCAGAGTGTGACTTTGATCTCCATCCAAATTGTGCGCTGGGAGACAAAGGAAGCATAAATGGTGCCAAGGAAGAAGAGAAGCCCAAAGATGGATGGGTTTGTGATGGAGATGTCTGCACCAAAGCCTGA 1713 0.4431 MADSVADVTHNVHSILSSSDRDFLLRNTGDQVKIDSLKGKKLGFYFSASWCGPCRGFTPKLVEVYDELSPNGEFEVVFVSADKDDEAFKSYFSKMPWLAIPFSDSETRGRLDELFHVNGIPHLALLDEAGKVITEDGVDIIRVYGAEAYPFTSKRVQELKDIEEEAKRNQSLRSILASRSRDFLISSDGNEIPISELEGKTVGLHFCATSYRACTLFTQKLKEVYKKLKENGENFEVVFIPLDDEEDAFKKELESAPWLSLPLKDKTCAKLIQYFELSELPTLVIIGPDGKTLHPNAAEAIEDHGVDAYPFTPEKFSELDEIAKAKEASQTLESVLVSGDQDFVIDKDGKKIPVSELVGKTVLLYFSAHWCPPCRAFLPKLIEAYHKIKAQNNDALEVVFISSDRDQESFNEFFAGMPWLALPFGDTRKEFLSRKFKVSGIPKLVAIGPSGQTVTKEARGLVGLYGADAYPFTEKRIKEIEAQKDDIAKGWPEKVTHETHEHELVLSRRNVYCCDGCKDEGDTWSYLCAECDFDLHPNCALGDKGSINGAKEEEKPKDGWVCDGDVCTKA* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1996 570 PANTHER THIOREDOXIN 4 541 - -
Mtr8g1996 570 Gene3D Glutaredoxin 335 473 - -
Mtr8g1996 570 Gene3D Glutaredoxin 16 153 - -
Mtr8g1996 570 Gene3D Glutaredoxin 174 312 - -
Mtr8g1996 570 Pfam Thioredoxin-like 40 132 IPR012336 -
Mtr8g1996 570 Pfam Thioredoxin-like 199 291 IPR012336 -
Mtr8g1996 570 Pfam Thioredoxin-like 359 452 IPR012336 -
Mtr8g1996 570 SUPERFAMILY Thioredoxin-like 184 294 IPR036249 -
Mtr8g1996 570 Pfam C1 domain 499 540 IPR004146 -
Mtr8g1996 570 SUPERFAMILY Thioredoxin-like 344 456 IPR036249 -
Mtr8g1996 570 ProSiteProfiles Thioredoxin domain profile. 14 161 IPR013766 -
Mtr8g1996 570 CDD TryX_like_TryX_NRX 342 472 IPR045870 GO:0004791
Mtr8g1996 570 SUPERFAMILY Thioredoxin-like 26 133 IPR036249 -
Mtr8g1996 570 CDD TryX_like_TryX_NRX 22 151 IPR045870 GO:0004791
Mtr8g1996 570 SUPERFAMILY Cysteine-rich domain 491 543 IPR046349 -
Mtr8g1996 570 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Mtr8g1996 570 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 541 - -
Mtr8g1996 570 ProSiteProfiles Thioredoxin domain profile. 319 482 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1996 Mtr-Chr8 29760716 29763277 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1996 K17609 - gmx:100809224 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1996 8 29760716 29763277 Mtr8g1996 8 29760716 29763277 ECH