Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1968 ATGCACAAACACACCCTCTTTCTCTTTTATGTCTTTCTCTCCACACTCACGGTTGGTTTAGCAGTGGATCATGCAGGAGACAAAAACCAAAACCCATTCACTGCGAAAGCTTTTGCAATTCGTTATTGGGACAGAGTGATCAAAAACAAGTTACCAAAACCAACATTCATCCTCAATAAGGCATCACCACTCAGCGCCACCGAGACCGCGGCTTTTGCGAAACACGCGGCAGCCAACACACTCTCCACAAAGTTGCCGGAGTTCTGCTCGGCTGCCCATCTTCTTTGCTTCCCAGAAGTAACTCCAAATCTTGCAAAACACTCTCAAGATGGAAAATTCTCCGTTTACAACGATGGTCAGAATTTCACCAACTATGGCACAGAAAGACCTGGTGGATTAGACTCCTTCAAGAACTACTCCAACGGCTTCGAAAACAATCCGATAAACGAGTTCCGGCAATACAGCCGGAGCTCAGCCGGTCATAACGACAGTTTCACCAACTATGCTCTCGAAACCAATGTTGCAGATCAGAATTTCAACACTTACGGCTCTGGCGCTGCCGGTGGCTCCGGCGATTTCAAAGCATATGCTAAAGGCACCAACGTGCCTAACCTAAGGTTCACCACCTACTCCGTCGGCGTTGCAGGTAGGCAACAGGAGTTCACTAGCTACAGTGAAGCCGGAAACGCCGGTGATCAGAGTTTCGGCAACTACGGAAAAGACTCCGCAGGTGCCGAAAACAAGTTCACGGCGTATGGTACAGACTCTAATGTTGCTTCTTCAGGTTTTTCAAGTTATGCGGATCAAGGTACAGGTAATAAAGACACGTTTGTTAATTACGGTGTTAATATGAATAATCCAACAGAAAATTTCAAAAATTATGCAAGTGGAAGTTTAGGTGCTGCTGAAAAATTCTCAAACTATAGAGATCAAGCCAATGTGGGTGCCGACTCGTTTACTTCCTATGCTAAGGACTCAACGGGTGGGACCCATGTTGATTTTGATAACTATGGTAAATCTTTTAACGAAGGAACCGACAGTTTCAAAGGGTATGCTAAAGGTGCTGATGCGGATCATAAGATAACATTCAAAGGTTATGGTGTTAATAACACGTTTAAGGATTACGATAAAAAAGGTATTTCTTTTGCTGGTTATACTAAGAAATCTTCTTCTTCAACAAATTCTGTTAGTGAAAGTGTTAGTTTGGCAAAAAAATGGGTTCAACCTGGTAAGTTTTTCCGAGAAAAGATGTTGAAACAAGGGGTGGTTATGCCTATGCCGGATATTAAGGATAAATTACCGCCAAGGTCGTTTTTACCACGTACCATTTTGACCAAATTACCCTTTGCATCTTCTAAGTTGAATGAGTTGAAGCAAGTTTTTAAGGTGTCTGAGAATTCCTCGATGGATAAGATGATAGTGGACTCATTGGGTGAGTGTGAGAGGGCACCGAGTATGGGTGAGACAAAGCGTTGTGTTGGTTCACTTGAGGATATGATTGACTTTGCAACTTCAGTTTTGGGCCATGATGTAACTGTTCGATCAACTGAGAGTGTAAATGGATCGGGCAAAAATGTCATGGTTGGAAGGGTTAAAGGGATCAATGGGGGTAAAGTTACTGAATCTGTGTCATGTCACCAAAGTTTGTTTCCTTATTTGCTATACTATTGCCACTCGGTTCCAAAGGTTCGTGTTTATGAAGCAGATCTTTTAGATCCTGAGTCTAAGGTGAAGATAAATCATGGTGTTGCTATTTGTCACTTAGATACAACTGCTTGGAGCCCAACACACGGTGCATTCATGGCTCTTGGGTCTGGTCCGGGTAAGATTGAAGTGTGTCATTGGATCTTTGAGAATGACATGACCTGGACTACTACCGACTAA 1884 0.4321 MHKHTLFLFYVFLSTLTVGLAVDHAGDKNQNPFTAKAFAIRYWDRVIKNKLPKPTFILNKASPLSATETAAFAKHAAANTLSTKLPEFCSAAHLLCFPEVTPNLAKHSQDGKFSVYNDGQNFTNYGTERPGGLDSFKNYSNGFENNPINEFRQYSRSSAGHNDSFTNYALETNVADQNFNTYGSGAAGGSGDFKAYAKGTNVPNLRFTTYSVGVAGRQQEFTSYSEAGNAGDQSFGNYGKDSAGAENKFTAYGTDSNVASSGFSSYADQGTGNKDTFVNYGVNMNNPTENFKNYASGSLGAAEKFSNYRDQANVGADSFTSYAKDSTGGTHVDFDNYGKSFNEGTDSFKGYAKGADADHKITFKGYGVNNTFKDYDKKGISFAGYTKKSSSSTNSVSESVSLAKKWVQPGKFFREKMLKQGVVMPMPDIKDKLPPRSFLPRTILTKLPFASSKLNELKQVFKVSENSSMDKMIVDSLGECERAPSMGETKRCVGSLEDMIDFATSVLGHDVTVRSTESVNGSGKNVMVGRVKGINGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKVKINHGVAICHLDTTAWSPTHGAFMALGSGPGKIEVCHWIFENDMTWTTTD* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1968 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 4 626 - -
Mtr8g1968 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 4 626 - -
Mtr8g1968 627 ProSiteProfiles BURP domain profile. 412 626 IPR004873 -
Mtr8g1968 627 SMART BURP_2 410 626 IPR004873 -
Mtr8g1968 627 Pfam BURP domain 412 624 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1968 Mtr-Chr8 29587692 29590127 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1968 - - gmx:100811362 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1968 8 29587692 29590127 Mtr8g1968 8 29587692 29590127 ECH