Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1964 ATGGAGCAAAAACAGAAAGGTCCTCTTCCTCTCAACTTGGACGCGCTTGTCGACAATACGCCGGCGGCGGAGCTTGTCGTCAAGCCGTCTGTTACGGTGGTTCCCGATCAGGAGCCGGCTCCGTTCATAGACGGCCTCGACCGCCTCAGAGATTACGAGCTCGAAGAACACATTAAGAGAAAGAAGAATCTTCTTGAAACCTCCGGTAAGAAGTTGCCGGATAAAGGTGCGAAACTTCGCGCTACTATCAAGAGCTACGAAGATGAGGTTCATCGCCGGAAAGTTAACCCTCGTCCTCAGGTTCAGAAAGTTATTGATGTGGACCAGAAGCCAAGACAGGCTACAAGCTCAAGTGCTGTTGGTGTATCTAATTACTCGAGACAAGAGAATTTGCCATTTCGTCCACAGTCAGAAGCCTCTTTAGCATCTAATATTATGAATAAAAGAGACAATAATACTAATTGTACAGATGTTGATGCATTTAGCAACGAGATGCCACATTTCAAGCATTGCAACAACCAGACAGTACGACTCAACAGAGAACCTAAAAGAAGAAAGAGACATCGATCATCTACAAGAAAATTGCCTTATCAATGCCCTAACAAACTTTCCAAACGTGATACTTTTAATGATAATAAAAGGTTCCGATCGAATTCCACCTTATCCTTACAGAACATTGCAAGGAATCTACAAAGACAGATTTCGAAAGATAAGGGTGCATTTCAGACAAGTCAGTCAGATGGCTCAAGGTCCAGGAAGGGTCAAGTTCAACCCATTGTTCTTGATGTGGACGACGACGATGAAGACGACATTGAAGACGACGAAGATGACAGCGAAGATCCTCATATTCTGGATAAAACAGAAAATAAAGTTCCTGAATATTTGAAAGAAGCTAAGGTTTATTTTCCATCACGAGATGATCCCGAGTGTGTTGAAATTTGTTACAATGACATGGAATGCCTTGCTCCTGAAGGCTACTTAACATCAACTATCATGAACTTTTACATACGATATTTGCAGCAGCAAGTATCTCTGACAACATCTGACTGCCATTTTTTCAACACATATTTCTACAAGAAACTTAAAGAAGCCGTCTCCTGCAAGGAAAGCAACAGAGAGACAATTTTTTCCAAGTTCAGAAGGTGGTGGAAGGGTGTAAATCTTTTTGAGAAGGCATATGTTTTGATTCCAATACACCAGGATCTTCATTGGAGTTTGATCATTATTTGTATCCCGGACAAAGATGATGAATCAGGACCGATCATACTTCATTTGGATTCTTTGGGTCTTCACTCGAGTCGATCAGTTTTTGATAATATTAAAAGATATTTGATTGAAGAAAAGAACTATTTGAGTCGAGAATGCGCGTCTTCAGATGTTCCGATGGCAGACAGAATATGGAAGAGTCTTTCTCGTAGAATTGAAACTCAAGTCATAGCCGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTTTTTGTACTGTATTTCATTGAGCGTTTCATAGGAGAGGCACCTGAAAGACTGAAAAAGAAAGATTTAACAAATAATCAAAGGTTTGGCAAGCGATGGTTCAAACCTGAAGAGGCATCCAGTTTGAGAGTGAAAATCCACAAGTTGCTTGTAGCAGAACTACGTAATTCAATCAAGCCTGATGGCATCACAGAATCTTCTCCGTCATCTCCTGGAGCTGCAACTGAATGCGTTGAGACTGCCAAGGCAGAATCATCTCTGTCATCTGCTGGCGCTGCAACTGAATGCGTTGAGACTGCCAAGACAGAATCTTCTCCATCATCTGCTGGCGCTGCAACTGAATGTGTTGAGACTGCCAAGACAGAATCTTCTCCGTCATCTGCTGGCGCTGCAATCGAATGTGTTGAGATTGCCAAGACAGAATCTTCGCTGTCATCTGCTGGTGTTGCAACTGAATGTGTTGAGACTGCCAAGGACTCTTCGATCGAAGATGGCATCATGAGTTGCAATTCTGACATAATTGAATGA 2001 0.4233 MEQKQKGPLPLNLDALVDNTPAAELVVKPSVTVVPDQEPAPFIDGLDRLRDYELEEHIKRKKNLLETSGKKLPDKGAKLRATIKSYEDEVHRRKVNPRPQVQKVIDVDQKPRQATSSSAVGVSNYSRQENLPFRPQSEASLASNIMNKRDNNTNCTDVDAFSNEMPHFKHCNNQTVRLNREPKRRKRHRSSTRKLPYQCPNKLSKRDTFNDNKRFRSNSTLSLQNIARNLQRQISKDKGAFQTSQSDGSRSRKGQVQPIVLDVDDDDEDDIEDDEDDSEDPHILDKTENKVPEYLKEAKVYFPSRDDPECVEICYNDMECLAPEGYLTSTIMNFYIRYLQQQVSLTTSDCHFFNTYFYKKLKEAVSCKESNRETIFSKFRRWWKGVNLFEKAYVLIPIHQDLHWSLIIICIPDKDDESGPIILHLDSLGLHSSRSVFDNIKRYLIEEKNYLSRECASSDVPMADRIWKSLSRRIETQVIAVPQQKNEYDCGLFVLYFIERFIGEAPERLKKKDLTNNQRFGKRWFKPEEASSLRVKIHKLLVAELRNSIKPDGITESSPSSPGAATECVETAKAESSLSSAGAATECVETAKTESSPSSAGAATECVETAKTESSPSSAGAAIECVEIAKTESSLSSAGVATECVETAKDSSIEDGIMSCNSDIIE* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1964 666 MobiDBLite consensus disorder prediction 233 286 - -
Mtr8g1964 666 SUPERFAMILY Cysteine proteinases 303 543 IPR038765 -
Mtr8g1964 666 PANTHER UBIQUITIN-LIKE PROTEASE 4 45 562 - -
Mtr8g1964 666 MobiDBLite consensus disorder prediction 174 216 - -
Mtr8g1964 666 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 45 562 - -
Mtr8g1964 666 Pfam Ulp1 protease family, C-terminal catalytic domain 326 527 IPR003653 GO:0006508|GO:0008234
Mtr8g1964 666 Gene3D - 302 542 - -
Mtr8g1964 666 Gene3D - 350 478 - -
Mtr8g1964 666 MobiDBLite consensus disorder prediction 261 281 - -
Mtr8g1964 666 MobiDBLite consensus disorder prediction 233 253 - -
Mtr8g1964 666 ProSiteProfiles Ubiquitin-like protease family profile. 311 501 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1964 Mtr-Chr8 29524491 29538627 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1964 K16287 - gmx:100790705 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1964 8 29524491 29538627 Mtr8g1964 8 29524491 29538627 ECH