Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1902 ATGATGGACCTAAACAATCATATAAGACTTGCTCTCTTGCTCATCTTCATGTGCTTATCTATCAATTTTGAAGCAAATGAATGTTCAAACCAAACTTCATCACTGAAAAATCAGATTCTTGAGGTTGCTAACAACCCCAACACAGTGAAATGGATGAAGCAAATAAGAAGAGAAATCCATGAATATCCAGAACTTGGATATGAGGAATTCAGAACAAGTTCTGTGATAAGGCGTGAGCTTGACAAGTTAGGTATATCTTATCAATGGCCTGTTGCTAAAACTGGAGTTGTTGCTAAAATTGGTTCTGGATTTCCTCCATTTGTTGCTCTTAGAGCTGACATGGATGCTTTGCCAATTCAGGAACTTGTTGATTGGGATCATAAGAGCAAAGTAGATGGGAAAATGCATGCTTGTGCACACGATGCCCATGTTGCGATGCTTCTCGGTGCTGCAAAGATACTGCAAGAAATGAAAAATAAATTAAAGGCTACTGTTGTTCTTATATTCCAACCAGCGGAGGAAAAAGGCATAGGTGCGAGAGACATGATCCAAGAAAATGTGCTTGAAGATGTAGAGGCTATTTTCGGATTGCATTTAGCGACACAGTATCCCTTAGGTGTTGTTGCATCACGACCGGGGGATTTTTTAGCAGGATGTGGAAGCTTCAAAGCAAAGATCAAAGGGGGTTTAGCGGAAATTCCGCAGCATTGTCTTGATCCTGTTTTGGCCGCTTCAATGTCGGTGATTAGCTTGCAAAACATTGTTTCAAGGGAGGTGGATCCTTTAGATTCCCAGGTAGTTTCTGTGGCAATGGTACATTCAGAGTCTGCTCACGAACTCATTCCTGATTCAGTAACATTTGGAGGCACTTATAGAGCAATAAGCAAAAAGAGCTTCAATGCACTAAGGCAAAGGATAGAGGAGGTTATCAAAGGGCAAGCAAAAGTACATAGGTGCACTGCAGAGGTTGAGTTCTTTGGTAAAGAACATCCAACAATCCCTCCAACTACAAATGATGAGAGAATACACCAACTTGGAAGACAAGCATCAAGTATGATTGTTGGAGAAGAGAACATAAAATTAGCACCAACCTACACAGCAAGTGAAGATTTTGCATTTTACTTGGAAAAAGTTCCCGGCTCATTTTTCCTCTTAGGTATACAAAATGAGAAGGTTGGATCCATATATTCAGCTCATAGTCCTCACTATTTTATTGATGAAGATGTTCTTCCAATTGGTGCTGCGATACATGCAGCATTTGCTCTTTCATATCATTCACATTCAACAATTTCTTATCTTTAG 1302 0.3994 MMDLNNHIRLALLLIFMCLSINFEANECSNQTSSLKNQILEVANNPNTVKWMKQIRREIHEYPELGYEEFRTSSVIRRELDKLGISYQWPVAKTGVVAKIGSGFPPFVALRADMDALPIQELVDWDHKSKVDGKMHACAHDAHVAMLLGAAKILQEMKNKLKATVVLIFQPAEEKGIGARDMIQENVLEDVEAIFGLHLATQYPLGVVASRPGDFLAGCGSFKAKIKGGLAEIPQHCLDPVLAASMSVISLQNIVSREVDPLDSQVVSVAMVHSESAHELIPDSVTFGGTYRAISKKSFNALRQRIEEVIKGQAKVHRCTAEVEFFGKEHPTIPPTTNDERIHQLGRQASSMIVGEENIKLAPTYTASEDFAFYLEKVPGSFFLLGIQNEKVGSIYSAHSPHYFIDEDVLPIGAAIHAAFALSYHSHSTISYL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1902 433 PANTHER PEPTIDASE M20 FAMILY MEMBER 25 430 IPR017439 GO:0016787
Mtr8g1902 433 SUPERFAMILY Bacterial exopeptidase dimerisation domain 231 334 IPR036264 -
Mtr8g1902 433 CDD M20_IAA_Hyd 52 424 IPR044757 GO:0009850|GO:0016787
Mtr8g1902 433 Gene3D Zn peptidases 53 418 - -
Mtr8g1902 433 PIRSF Amidohydrol_AmhX 37 428 IPR017439 GO:0016787
Mtr8g1902 433 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 25 430 - -
Mtr8g1902 433 SUPERFAMILY Zn-dependent exopeptidases 48 425 - -
Mtr8g1902 433 TIGRFAM amidohydrolases: amidohydrolase 52 413 IPR017439 GO:0016787
Mtr8g1902 433 Pfam Peptidase family M20/M25/M40 109 421 IPR002933 GO:0016787
Mtr8g1902 433 Gene3D - 217 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1902 Mtr-Chr8 28763876 28767652 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1902 K14664 - gmx:100780711 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1902 8 28763876 28767652 Mtr8g1902 8 28763876 28767652 ECH