Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1866 ATGGAGTATTTCAACAAATCAAAGGCTGTGAAACTACGCAGCCACCTAGGGAAGTACCTAGTAGCAGATGAAGACAACAACAACATCCGTCAGAGCAGAAATGGAACAACCAAAAAATCACTATGGTTTATCGAACCGGTCGAAACAAAACCTCACCATATACGCCTCAGGAGCCACCATGGCCGTTACCTAACCGCGACGGACACGCCATTTCTCCTCGGCATGACCGGAAACAAAGTTGTCCAAGCCGATTACGACGCGGGTTTGGGCTGGAAATATGAATGGGAACCAATAAAAGAAGGGTTCAACGTGAAACTGAGGAGTTGGTGTGGAAAATATTTGAGAGGTAATGGTGGAACACCACCATGGAGAAATTCTATTACACATGATGATCCTACCTCTGCTACACATAATTGGATTCTTTGGGGTGTAGAGTTTGTGGAGTTATCATTGGCTAATCAGGAGAATGTTGAATTGTTGAATCAAATTAGTTTTGCTTCTATTTCTTCATTTGATTCTCGTGATGAGGTTAATGATTCTGAATTGGTTTCTTCTATGAAGTCTCGGTCTTCCTTGAAGAGTCGTAAGAATTCAATGTTGCAGAAAACTTCCACCAACAACAACAACAACAGCTTCACCATCTCATCAATGGAGCTTTTCCAACGAGCAAAAGCAGTTCGACTAAGAAGCCACCACGACAAATACCTCCACGCAGAAGAAGACGAAGAATCAACAAACCAAGACAGAAACGGATCATCAAAAAACGCTAAATGGACAGTTGAACACATCCCTGAATACGACAACATCATCCGTCTCAAAAGCTGTTACAACAAATACTTAACAGCATCAAATCAGCCTTTACTTCTCGGCGTAACGGGTCGAAAAGTGATTCAAACACTGCCAAGGAGACTCGATTCGTCTGTTGAATGGGAACCGGTTAGAGAAGGTGCGCAGGTTAAGCTGAAAACGAGATATGGGAATTTTCTTAGAGCTAATGGTGGGTTACCACCTTGGAGAAATTCAGTTACGCATGATATTCCTCATAGAAGTGCTACTCAGGATTGGATTCTTTGGGATGTTGATGTTCTTGAGATTCATGTTGGAAATCCACCTCCTCCTCCGATTCCTCATTCGGATTCTCTTGATTTTGGATCTTCTACTCCTTCTGCTCTTTCCTTCAAATCTGATCGCTTCTCTAGACAAGAGTCAACAGATAGCGTTGGTTCGCCGCCAAAGATGGAGGGGAGAACTATATACTACCATGTTGCTGAGGATAATGGAGATGTGGATGATGAGAATGTGCAGGGCTATTCCTTGGTGTTCAATGGGAATGACGTCGAGCAGCTGACTCGTAAGTTCGTGGAAGAGACAGGACTTGACGGAGTTATTGTGTGTAGTCGAAGTCCTTTGAATGGAAAACTTTACCCTCTTCGTTTGCATCTTCCTCCAAACAATGTTACCATGCAGGTTGTTTTGGTCCTTCCTAACTCAAAAGTTGCAAAAGAATTTGAAGAACAAGGTTTACTGTGA 1530 0.4288 MEYFNKSKAVKLRSHLGKYLVADEDNNNIRQSRNGTTKKSLWFIEPVETKPHHIRLRSHHGRYLTATDTPFLLGMTGNKVVQADYDAGLGWKYEWEPIKEGFNVKLRSWCGKYLRGNGGTPPWRNSITHDDPTSATHNWILWGVEFVELSLANQENVELLNQISFASISSFDSRDEVNDSELVSSMKSRSSLKSRKNSMLQKTSTNNNNNSFTISSMELFQRAKAVRLRSHHDKYLHAEEDEESTNQDRNGSSKNAKWTVEHIPEYDNIIRLKSCYNKYLTASNQPLLLGVTGRKVIQTLPRRLDSSVEWEPVREGAQVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRSATQDWILWDVDVLEIHVGNPPPPPIPHSDSLDFGSSTPSALSFKSDRFSRQESTDSVGSPPKMEGRTIYYHVAEDNGDVDDENVQGYSLVFNGNDVEQLTRKFVEETGLDGVIVCSRSPLNGKLYPLRLHLPPNNVTMQVVLVLPNSKVAKEFEEQGLL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1866 509 Gene3D - 224 343 - -
Mtr8g1866 509 SUPERFAMILY Actin-crosslinking proteins 5 140 IPR008999 -
Mtr8g1866 509 MobiDBLite consensus disorder prediction 393 413 - -
Mtr8g1866 509 MobiDBLite consensus disorder prediction 182 208 - -
Mtr8g1866 509 Gene3D - 5 145 - -
Mtr8g1866 509 MobiDBLite consensus disorder prediction 369 388 - -
Mtr8g1866 509 Pfam Domain of unknown function (DUF569) 1 142 IPR007679 -
Mtr8g1866 509 Pfam Domain of unknown function (DUF569) 217 358 IPR007679 -
Mtr8g1866 509 PANTHER ACTIN CROSS-LINKING PROTEIN 1 155 - -
Mtr8g1866 509 PANTHER ACTIN CROSS-LINKING PROTEIN 204 506 - -
Mtr8g1866 509 SUPERFAMILY Actin-crosslinking proteins 221 362 IPR008999 -
Mtr8g1866 509 MobiDBLite consensus disorder prediction 237 256 - -
Mtr8g1866 509 MobiDBLite consensus disorder prediction 183 208 - -
Mtr8g1866 509 MobiDBLite consensus disorder prediction 393 410 - -
Mtr8g1866 509 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 155 - -
Mtr8g1866 509 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 204 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1866 Mtr-Chr8 28331983 28343022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1866 - - mtr:MTR_8g061880 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1866 8 28331983 28343022 Mtr8g1866 8 28331983 28343022 ECH