Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1821 ATGGATCCTTCATCATCTTCCCCACAATCCCTCCACCTCGCCATGGCCGCGTTACTCGGCGCTTCATTCATGGCAATCTCCGCTTTCTACATCCACCGCCGTACCGTCGATCAAGTCCTCCATCGCATCATCGAAATCCGCCGCACACCGCGGACCGATGAACCTGATTACATCTCCGAGGAGAATTACGACGAAGACGATTATGATGATGATATGACCGGGTTTGACGGCGGCGAAGAAATTGAAACGGATACTGATGAGAGAAACTATCAACGAACGTTGTCGAGGTCTGTTGATGAGAATATGAACTTTCTGAGAAGTGTTAGGGTTTCGTCTTCCATGCCGGATGTTGTTTCTGCTACTGAATGGTTTCGTGATGGTCGTAAGAATCGTTCTTCTTCGCATGAGAATCTTCATTCTGTTCCGTTAGGACTTCCTTCTCTTCGAACGAGGTCGAAGCATGAGAGTTCTCAGATTTCGAGTTCTTATAAGAGGATAGCTTCTGTTGGTATAATTAAGACTCCGAGATCACCGGGACGGAATGCGTTTGATAATGTTGATGATTCTGATGATGATGGAACACAACTTAGTGATGATAATCACATTCCTTTTTACCCTGTGACCGGAGATTCTACAAATTCTTATGGACTTAATCCAACGGTTCCACTTGGAGTTGATGATGTAAATTGTGCAAAAAATCAGATGTTTGGAGAGGTTTCAAAAGAAGCAGGAGCTGATGCAAATATGAATGGTGGAATGACAGATTCAACTTCAGTAAATGTAGCTGGGAACGACCTTGTATTTGTCAATAATGTCTTGTCTACAAGAAGCACAGTGCTTGAGCCAATGAATATTGAAGAGGAGGAAGTTTGCAAGATGATTCAAGAATGCTTAGATTTGCGCAAGAAATATGTTTACAAGGAAAATGTCCTTCCATGGAAGGCTGAGCCTGTCGAAACTAACTCTGATCCATTTCACTTTGAACCAGTTGAAGCAACAGGACACCACTTTAAGATGGAAGATGGAGTCGTACGTGTTTTTGCAAGTAAAACTGACACTGAAGAGCTATTCCCTGTTGCAAGCGCAACGAGTTTTTTTACTGATATGGATTACATTCTTAAAGTTATGTCTATTGGGAATGTTCGCTCTGCATGCTACCACAGGCTACGGTTTCTTGAGGAAAAATTCCGCCTTCATCTGTTACTGAATGCAGATCGGGAGTTTGTCGCTCAGAAAAGTGCACCACACCGAGACTTCTACAATATCCGAAAAGTTGATACTCATATTCATCATTCTGCATGCATGAATCAGAAGCATCTGCTCCGCTTCATCAAGTCAAAATTAAGAAAAGAACCTGATGAGGTTGTTATTTTTAGGGATGGAAAGTATATGACGCTTAAGGAGGTGTTTGAGAGTTTGGATTTGACTGGATATGATCTGAATGTGGATTTGTTGGACGTCCATGCAGATAAGAGCACATTTCATAGATTTGACAAATTCAACCTAAAGTATAATCCTTGTGGACAGAGTAGACTCAGAGAGATATTTTTAAAGCAGGATAATCTTATCCAGGGAAGGTTTCTGGCTGAAGTAACAAAGCAAGTTTTGTTAGATCTTGAAGCAAGTAAATATCAGATGGCCGAGTACAGGATCTCTGTTTATGGAAGAAAACAGAGCGAATGGGATCAGCTTGCAAGTTGGTTTGTGAACAATGCTCTTTATAGCAAGAATGCCGTATGGCTAATCCAGTTACCGCGTCTATATAATATCTACAGGAGTATGGGAATTGTTACCTCCTTTCAGAATATTCTGGATAACGTGTTTATTCCTCTATTTGAAGCCACAGTAGATCCAAATTCTCATCCTCAATTACATTTGTTTTTGAATCAGGTGGTTGGATTTGATCTTGTAGATGATGAAAGCAAACCAGAAAGGCGTCCAACTAAGCATATGCCTACTCCTGCTCAATGGACAAATGAATTCAATCCAGCATACTCTTATTACCTCTATTACTGCTATGCAAACTTGTACACACTCAACAAGCTGCGCGAGTCTAAAGGAATGACAACAATTAAATTGCGGCCTCATTGTGGAGAGGCAGGTGATAGTGATCATTTGGCTGCTGCCTTCCTCCTATGCCATAACATTTCCCATGGCATTAATCTACGGAAGACTCCGGTTTTGCAATATTTATATTACCTTGCGCAGGTTGGATTAGCTATGTCACCGCTTAGCAACAATTCCCTTTTCCTGGACTATCACCGCAATCCTTTGCCAATGTTTTTCCAGCGAGGGCTGAATGTCTCTCTCTCTACTGACGATCCTTTGCAAATTCATTTGACAAAAGAGCCACTGCTAGAAGAATATAGCGTTGCAGCAAAGGTATGGAAACTCTCTGCTTGTGACCTGTGTGAGATAGCTAGAAACTCTGTTTACCAATCTGGATTTTCACATCAAGATAAGTTACACTGGCTAGGGGATAAATATTTCTTAAGAGGTTCTGAAGGAAATGACATTCACAAGACAAATGTTCCCAGTTTGAGGATCTCTTTCCGATATGAGACATGGAAGGATGAAATGCAATATATTTATGCTGGTCAAGCCACCTTTCCTGAAGATGTAGATCCTTGA 2631 0.4143 MDPSSSSPQSLHLAMAALLGASFMAISAFYIHRRTVDQVLHRIIEIRRTPRTDEPDYISEENYDEDDYDDDMTGFDGGEEIETDTDERNYQRTLSRSVDENMNFLRSVRVSSSMPDVVSATEWFRDGRKNRSSSHENLHSVPLGLPSLRTRSKHESSQISSSYKRIASVGIIKTPRSPGRNAFDNVDDSDDDGTQLSDDNHIPFYPVTGDSTNSYGLNPTVPLGVDDVNCAKNQMFGEVSKEAGADANMNGGMTDSTSVNVAGNDLVFVNNVLSTRSTVLEPMNIEEEEVCKMIQECLDLRKKYVYKENVLPWKAEPVETNSDPFHFEPVEATGHHFKMEDGVVRVFASKTDTEELFPVASATSFFTDMDYILKVMSIGNVRSACYHRLRFLEEKFRLHLLLNADREFVAQKSAPHRDFYNIRKVDTHIHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNALYSKNAVWLIQLPRLYNIYRSMGIVTSFQNILDNVFIPLFEATVDPNSHPQLHLFLNQVVGFDLVDDESKPERRPTKHMPTPAQWTNEFNPAYSYYLYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGDSDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQVGLAMSPLSNNSLFLDYHRNPLPMFFQRGLNVSLSTDDPLQIHLTKEPLLEEYSVAAKVWKLSACDLCEIARNSVYQSGFSHQDKLHWLGDKYFLRGSEGNDIHKTNVPSLRISFRYETWKDEMQYIYAGQATFPEDVDP* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1821 876 SUPERFAMILY Metallo-dependent hydrolases 266 864 IPR032466 -
Mtr8g1821 876 TIGRFAM AMP_deaminase: AMP deaminase 333 863 IPR006329 GO:0003876|GO:0032264
Mtr8g1821 876 ProSitePatterns Adenosine and AMP deaminase signature. 769 775 IPR006650 GO:0009168|GO:0019239
Mtr8g1821 876 Gene3D - 335 859 - -
Mtr8g1821 876 Gene3D - 435 525 - -
Mtr8g1821 876 CDD AMPD 365 860 IPR006329 GO:0003876|GO:0032264
Mtr8g1821 876 MobiDBLite consensus disorder prediction 174 199 - -
Mtr8g1821 876 Pfam AMP deaminase 290 863 IPR006329 GO:0003876|GO:0032264
Mtr8g1821 876 PANTHER AMP DEAMINASE 9 875 - -
Mtr8g1821 876 MobiDBLite consensus disorder prediction 129 160 - -
Mtr8g1821 876 PANTHER AMP DEAMINASE 9 875 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1821 Mtr-Chr8 27337201 27348722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1821 K01490 - gmx:100793831 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1821 8 27337201 27348722 Mtr8g1821 8 27337201 27348722 ECH