Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1819 ATGGTGTATTTAACAAGGGAACTTCACTTAGATCAAGTTTATGCTACTAACATACTCTACATATGGGGTGGGATCACAAACTTTGCTCCTTTAGTTGGTGCCTTCATTTCTGATGCATACGTAGGCCGCTTTTGGACTATAGCGTTTGCTTCTTTCGCTTCACTCATGGAGATGATAATGGTGGCTTTAACATCTTGGTTACCAAAGTTGCACCCTCCACCTTGTACTCCACATCAACTAGTAATTGACGAATGTATCAAAGCAAATAATTCTCAAATGAGTGTGTTATTCTTGGGACTTGGTTTCCTAACCATTGGCTCTGCTGGGATAAGACCATGTAGCATACCATTTGGTGTTGACCAATTTGATCCAACAACAAATGAAGGAAAGAAAGGGATCAATAGTTTCTTTACTTGGTATTATACCTCATTAACATTGATATTATTATTCACCCAAACAGCGATGGTTTATATCCAAGACTCGGTGAGTTGGAAGTTAGGGTTTGGGATACCTGTTGTATGCATGGGTTGTGCGATAATTTTGTTCTTTATTGGAACAAGGGTCTATGTGCATGTGAAACCTGAAGGAAGCATTTTTTCTGGAATTGTCGTAGTTTTGGTGGCTGCCTACAAAAAGAGAAATGTTAAGCTTCCAAGTGAGGAGGATTCATATGCAGTTTTCTATGATCCTCCATTGAATGGTACTACTGTTTCATCAAAGCTCTCTTTAACTCAACAATTCAGGGCCTTGAACAAAGCAGCACTAATAGTGGAGGGTGAATTAAATTCAGATGGGAGCATAGTAAACAAGTGGAAACTTGCAAGCATTCAACAAGTAGAAGAGGTTAAATGTTTAGCAAGAACTTTTCCAATTTGGGCAGCTGGGATTCTTAGTCTCACATCCATAGCACAACAAGGAACATTCACTGTATTACAAGCCTTGAAAATGGACAGACACTTAGGACCCAAATTTCAAATCCCAGCTGGTTCAATGGGAGTCATATCATTAATCACCATAGCTTTATGGCTTCCATTATATGAGAAATATTTAGTGCCAACCCTAAGAAAAATGACTAATAAAAAAGAAGGTATTACCCTACTTCAAAGAATTGGAGTTGGCATGTTATTCTCTATTCTTTCTATGATTGTTGCTGGCTTTGTTGAGAAGATTAGAAGAGATTCAGCAAAATCTAACCCAAGTCCACTTGAAATTGCTCCCATGTCAGTTTTATGGCTAGCACCTCAATTGATCCTTATGGGTCTTTGTGAGGCCTTCAATATTCTAGGGCAAATAGAGTTCTTTAATATGCAATTTCCTGATCACATGAGAAGCATTGGAAATTCATTATTTGCATGTTCTTTTGCTGGGGCTAGCTATGTGAGCAGTATACTAGTCAACATAATTCATCATACTACAAGAACACATGATCATCCTGATTGGTTGGTAAATGATATAAACAAGGGCAAGATAGACTACTTTTATTATCTTATAGCTATGATAGGGACATTGAACTTTGTTTTTTTTATTTATGTTGCTAGAAGATATCAATACAAGGGTGTTGTGAACCTAGATAAACCTTCTGATGTTGAGCTAGAAACACATGCAAAATAA 1611 0.3743 MVYLTRELHLDQVYATNILYIWGGITNFAPLVGAFISDAYVGRFWTIAFASFASLMEMIMVALTSWLPKLHPPPCTPHQLVIDECIKANNSQMSVLFLGLGFLTIGSAGIRPCSIPFGVDQFDPTTNEGKKGINSFFTWYYTSLTLILLFTQTAMVYIQDSVSWKLGFGIPVVCMGCAIILFFIGTRVYVHVKPEGSIFSGIVVVLVAAYKKRNVKLPSEEDSYAVFYDPPLNGTTVSSKLSLTQQFRALNKAALIVEGELNSDGSIVNKWKLASIQQVEEVKCLARTFPIWAAGILSLTSIAQQGTFTVLQALKMDRHLGPKFQIPAGSMGVISLITIALWLPLYEKYLVPTLRKMTNKKEGITLLQRIGVGMLFSILSMIVAGFVEKIRRDSAKSNPSPLEIAPMSVLWLAPQLILMGLCEAFNILGQIEFFNMQFPDHMRSIGNSLFACSFAGASYVSSILVNIIHHTTRTHDHPDWLVNDINKGKIDYFYYLIAMIGTLNFVFFIYVARRYQYKGVVNLDKPSDVELETHAK* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1819 536 PANTHER PEPTIDE/NITRATE TRANSPORTER 2 525 - -
Mtr8g1819 536 Pfam POT family 44 473 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr8g1819 536 CDD MFS_NPF1_2 1 515 - -
Mtr8g1819 536 SUPERFAMILY MFS general substrate transporter 2 516 IPR036259 -
Mtr8g1819 536 Gene3D MFS general substrate transporter like domains 1 521 IPR036259 -
Mtr8g1819 536 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 2 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1819 Mtr-Chr8 27322454 27329003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1819 1 518 Organic Solute Cotransporters AT1G69870 59.266 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1819 - - gmx:100809657 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1819 8 27322454 27329003 Mtr8g1819 8 27322454 27329003 ECH