Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1799 ATGAGCATCTCCACCACTGTTTTCTCTGAACCACTCTTCAATTTCAAACTCTCTCACTACCACAGATTAGCTACCATTAACCGTTTCAAGCCAAATTCTTCACACTCTCTCTCTTCCACTTCCAATATTATTAACTATGGTTCTTCTTGTTCTTGGACATTGAAGCCACCGCATAAGTTTCTCTCTCCAAAATTTGTAACTTTTGCTACAAATACTGATACCCTTCAACAGATTCAATCTTCTGATGATGTCATTTTCAGTCAGACTCATCCCATCAACAGAATTCAACTGGTGGAGGGAAAGGTGTTTATAAGATTAGATCAAGGGAATGATTTGAAGAATTCGGAGCTTATAGTTGGATGCAATCTACCAGGAAAATGGATTCTTCATTGGGGAGTTTCTGGTGTGGATGATATTAAAAGTGAATGGAATCAACCACCCCGTGATATGATACCTCCAGGATCTATTCCTGTAAAGGACCATGCAATAGAGACACCTTTGAAGAAATCATCAACATCACCGGAAGGAGATACTTTTTATGAAGTCAGGATCAGTTTTAAGCCTAGCGATGAGATTTCAGCGATTAATTTTGTTCTCAAGGACGAGGAGACTGGTGCTTCGTATCAACACAAAGGAAGAAACTTCAAAGTTCCTCTGGTAAACTATCTTAAGGAGGATGCTAATTTAATTGGACCTAAAACAGGCTTTAGTTTATCCCAAGGAGACATAGGACAGATGTCTAACGTTATCCTGGATTCGGAAGCAACCAATGACAAAGTTCAAGATAGCAGCAGTGAATCGGAAAGTCCAAAAAAGGAAAATAGTCAAGTAGAAGGTTTCAATGTAGAACTGCCTTTAACCAAGGAAGTTACTGTCAATAACTCTATCAGTGTCTCCGTTAGGAAATGCTCCGAAACAGCTAAAAATATTTTGGATTTAGAAACGGATATACCAGGTAATATTTTCCTTCATTGGGGAGTTTGTAGAGATGATTTAAGAAGTTGGGAAGCTCCACCTGCTCCTCATCCACCACAAACTGTAGCATATAAAGACACAGTTTTGCGAACTCAATTAAAGCCAAAAGGAAGTGGAGAGGGAAGTTCAGCACAAATCTCTTTGGGAGAAGAATTTTCAGGATTTCTTTTTCTTCTTAAGATAAATGAAAATTCATGGTTAAATAACAAGGGAATTGATTTCTACGTCCCTCTCTCAACTTCCGGTAGCTTAGTTATTGGCAACAGAGAGGATCAATCGAAAGTTGTAAAGAGTGAAGAGGCAGGCGAAAACGAAAACTCTGAATTTACCAATGAAATAATCAATGAAATAAGGCATTTGGTTACTGGCATTTCATCTGTGAAGAGACGAAAAACGAAATCCAAAGAAGCTCAAGAAACCATTCTTCAAGAAATTGAAAGACTGGCCGCTGAAGCCTATAGTATCTTCAGAACCTCTGTTCCAACTTTCTCCGAGGAAGCTATTGTGGAATCCGAGGTTGTTTTGGATTCCGAATCACCTGAGTTGCCTCCGAAAATCATGTCCGGAACAGGCACAGGGTATGAAATTGTATGCCAAGGATTTAATTGGGAGTCTAATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGAAAGCTAAAGAACTAGCATCTCTTGGCTTCACTGTGATTTGGTTACCGCCACCTACAGACTCTGTTTCACCCGAAGGATACATGCCAAGGGATTTATATAATTTAAATTCTAGGTATGGTACCATTGATGAACTGAAGGACGTGGTGAAAGAATTCCATAAAGTTGGAATCAAAGTTCTAGGAGATGCTGTTTTGAATCACCGTTGTGCCGAGCATCAGAATAAGAATGGTATTTGGAACATATTTGGAGGTCGTCTCAACTGGGATGATCGTGCAGTTGTAGCTGATGATCCACATTTTCAGGGGAGGGGCAACAAGAGTAGTGGAGATAGTTTCCATGCGGCTCCAAACATTGATCATTCACAGGACTTTGTGAGAAACGATATTAAAGAATGGTTATGCTGGTTAAGGGAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTAAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATGGATGCAACCAAACCATATTTTTCCGTGGGAGAGTACTGGGATTCTCTCAGTTATACATATGGTGAGATGGATCATAATCAAGATGCACACAGGCAGAGGATCGTTGACTGGATCAGTGCTGCTGGTGGTACTGCAGGTGCATTTGATGTTACAACCAAAGGGATTCTTCACTCTGCGTTGGAAAGATGTGAGTATTGGCGCTTGTCGGATCAGCAGGGAAAACCCCCTGGTGTTATGGGATGGTGGCCGTCTCGTGCCGTTACTTTTATAGAAAACCATGACACTGGTTCTACACAGGGTCACTGGAGATTTCCCCACGAAAAAGAAATGCAAGGATATGCCTATACTCTTACACACCCAGGAACTCCATCAGTGTTCTTTGACCACATTTTTTCTCACTATAAAACTGAAATAGGGGCACTTCTCTCTATTCGGAAACGAAACGGGATCAACTGCAGAAGCACAGTTAAAATTACCAAATCAGAAAGGGACGTTTATGCTGCTATCATCGACGAAAAAGTTGCTATGAAGATCGGTCCTGGTCATTATGAACCACCTAGTGATTCCCAAAAATGGAAATCAGCTTGGGACGGAAGAGACTACAATATTTGGGAGCTGGAGGAATCATAA 2742 0.4066 MSISTTVFSEPLFNFKLSHYHRLATINRFKPNSSHSLSSTSNIINYGSSCSWTLKPPHKFLSPKFVTFATNTDTLQQIQSSDDVIFSQTHPINRIQLVEGKVFIRLDQGNDLKNSELIVGCNLPGKWILHWGVSGVDDIKSEWNQPPRDMIPPGSIPVKDHAIETPLKKSSTSPEGDTFYEVRISFKPSDEISAINFVLKDEETGASYQHKGRNFKVPLVNYLKEDANLIGPKTGFSLSQGDIGQMSNVILDSEATNDKVQDSSSESESPKKENSQVEGFNVELPLTKEVTVNNSISVSVRKCSETAKNILDLETDIPGNIFLHWGVCRDDLRSWEAPPAPHPPQTVAYKDTVLRTQLKPKGSGEGSSAQISLGEEFSGFLFLLKINENSWLNNKGIDFYVPLSTSGSLVIGNREDQSKVVKSEEAGENENSEFTNEIINEIRHLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIFRTSVPTFSEEAIVESEVVLDSESPELPPKIMSGTGTGYEIVCQGFNWESNKSGRWYMELKEKAKELASLGFTVIWLPPPTDSVSPEGYMPRDLYNLNSRYGTIDELKDVVKEFHKVGIKVLGDAVLNHRCAEHQNKNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDSFHAAPNIDHSQDFVRNDIKEWLCWLREEIGYDGWRLDFVRGFWGGYVKDYMDATKPYFSVGEYWDSLSYTYGEMDHNQDAHRQRIVDWISAAGGTAGAFDVTTKGILHSALERCEYWRLSDQQGKPPGVMGWWPSRAVTFIENHDTGSTQGHWRFPHEKEMQGYAYTLTHPGTPSVFFDHIFSHYKTEIGALLSIRKRNGINCRSTVKITKSERDVYAAIIDEKVAMKIGPGHYEPPSDSQKWKSAWDGRDYNIWELEES* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1799 913 Pfam Alpha amylase, catalytic domain 545 803 IPR006047 GO:0005975
Mtr8g1799 913 MobiDBLite consensus disorder prediction 254 280 - -
Mtr8g1799 913 PANTHER ALPHA-AMYLASE 87 909 - -
Mtr8g1799 913 Gene3D Glycosidases 520 853 - -
Mtr8g1799 913 MobiDBLite consensus disorder prediction 259 273 - -
Mtr8g1799 913 Gene3D - 854 910 IPR013780 -
Mtr8g1799 913 SUPERFAMILY (Trans)glycosidases 516 837 IPR017853 -
Mtr8g1799 913 CDD AmyAc_arch_bac_plant_AmyA 521 860 - -
Mtr8g1799 913 SMART alpha-amyl_c2 850 910 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mtr8g1799 913 SMART aamy 520 849 IPR006047 GO:0005975
Mtr8g1799 913 Pfam Alpha-amylase C-terminal beta-sheet domain 851 909 IPR012850 GO:0004556|GO:0005509|GO:0005975
Mtr8g1799 913 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 87 909 - -
Mtr8g1799 913 SUPERFAMILY Glycosyl hydrolase domain 854 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1799 Mtr-Chr8 27063443 27071935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1799 69 909 Glycoside Hydrolase AT1G69830 66.390 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1799 K01176 - gmx:100788193 1440.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1799 8 27063443 27071935 Mtr8g1799 8 27063443 27071935 ECH