Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1774 ATGTTGGAAGGTCGTTCGTGCTTGGTTCCGAGGTTGTTTTCTGGTTCTTGTCAGGCAGAGGCAGAGAATAATTGGTCTTTCATGAAATTCATGCCGGATTTGGAAATAAAAAACGGAAAGCGAGGTATTGATGATGAAGACGAACCGCAGCCGAGGAAGGTTAACAGGAGACTGGAATCTTGTTATCAAGGTGAGATGGATTCTGTTGTTCCACAAATCGATCTGGATGATGATCAGAGGAAGGATTTTGAGCCATTGAATGATTGCCAAAGTGTGGAAAATGTTGTTGCTTTTTCTGTCCTGTTTTTGGCTGAAAAATCGCAGCATTCGTTCGGTGATGAACTGCAGAATACGCAGCTTGATGATGGGAATTTGATTAATTCCACTGACGAGCCGACGGATGAACAGAAGGAACATCATGCAGGGGATTCATCAGATTCAAGTTCACTTTTGCCGCGCATGAATCGGGATAGCTCGATTACCTGTCTAAGCCGCTGTTCGAGGTCCGATTATGGTTCACTTGCCTCGCTGAATCAGAGCTTCCGCAACATAATCCGGAGTGGTGAGCTCTATCGTTGGAGGAGACTGAACGGTATCATAGAGCACTGGATTTATTTTTCCTGTGCCCTCCTCGAATGGGAAGCCTATGATCCAATTCGCGAACGGTGGATGCATTTACCTAGAATGGCTTCTAACGAATGCTTCATGTGTTCGGATAAGGAGTCTTTAGCGGTAGGTACCGAACTTCTTGTGTTTGGGAGGGAGTTGCAATCCCATGTTATATACAGATACAGTCTTTTGACAAACTCGTGGGAATCTGGAATGAGGATGAATTTTCCAAGATGCTTGTTTGGTTCTGCTAGCCTCAGAGAGATTGCGATTCTAGCTGGTGGTTGTGATTCAGATGGGCATATCCTTGATTCGGCTGAGCTCTATAACTCCGAGAATCAAACATGGGAAACACTCCCAAACATGATCAAGCCCAGGAAGATGTGTTCTGGGGTATTCATGGATGGAAATTTTTATGTTATCGGGGGAATCGGTGGACGTGATTCCAAGCTTCTTACCTGCGGTGAGGAGTATAATTTACAAACTAGAACATGGAAAGAAATTCCTAATATGTCACCCGGGCGTAGTGCTAGGGGATCGGAGATGCCTGCCACAGCCGAGGCACCACCTCTAGTAGCTGTTGTAAATAATGAACTATACGCCGCTGATTATGCTGACATGGAGGTTAAAAAGTACGATAAAGGTAACAAAGTGTGGCTTACAATTGGTAGATTACCAGAGAGAGCGGCATCGATGAACGGTTGGGGTCTAGCATTTAGGGCATGTGGAAATAGGCTCATTGTTATTGGCGGACCAAGGAGTCATGGCGAGGGTTTTATTGAACTCAATTCATGGGTTCCTAGTGAAGGACCTCCACAATGGAATCTACTTGCTAGAAAACAATCCGGTAACTTTGTTTATAATTGCGCCGTGATGGGATGCTGA 1494 0.4505 MLEGRSCLVPRLFSGSCQAEAENNWSFMKFMPDLEIKNGKRGIDDEDEPQPRKVNRRLESCYQGEMDSVVPQIDLDDDQRKDFEPLNDCQSVENVVAFSVLFLAEKSQHSFGDELQNTQLDDGNLINSTDEPTDEQKEHHAGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNQSFRNIIRSGELYRWRRLNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELQSHVIYRYSLLTNSWESGMRMNFPRCLFGSASLREIAILAGGCDSDGHILDSAELYNSENQTWETLPNMIKPRKMCSGVFMDGNFYVIGGIGGRDSKLLTCGEEYNLQTRTWKEIPNMSPGRSARGSEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKGNKVWLTIGRLPERAASMNGWGLAFRACGNRLIVIGGPRSHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVMGC* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1774 497 Pfam Kelch motif 328 375 IPR006652 GO:0005515
Mtr8g1774 497 Pfam Kelch motif 280 325 IPR006652 GO:0005515
Mtr8g1774 497 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 497 - -
Mtr8g1774 497 Gene3D - 197 487 IPR015915 GO:0005515
Mtr8g1774 497 MobiDBLite consensus disorder prediction 115 153 - -
Mtr8g1774 497 SUPERFAMILY Kelch motif 210 494 IPR015915 GO:0005515
Mtr8g1774 497 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 497 - -
Mtr8g1774 497 MobiDBLite consensus disorder prediction 115 130 - -
Mtr8g1774 497 SMART kelc_smart 292 339 IPR006652 GO:0005515
Mtr8g1774 497 SMART kelc_smart 248 291 IPR006652 GO:0005515
Mtr8g1774 497 SMART kelc_smart 340 388 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1774 Mtr-Chr8 26663903 26666790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1774 157 373 EF-hand Containing Proteins AT4G39560 25.806 3.32e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1774 - - gmx:100791897 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1774 8 26663903 26666790 Mtr8g1774 8 26663903 26666790 ECH