Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1682 ATGGGAATGAAGAGGCGATCGTATAAGAAGGAGTTAGGATGCATAGCCTGCAAAGAATTGGGTGAAGTAGGAGCCGGAAAACCCGGTTGGGTGGTAGACAACCCGAACCTTCTCTCCGCCATCGATAATCACTCTATACTCCTCGCCAACCGATCCACCATCCTCCTCCTCTCATGGTCATCCGATTCCTCCCAATCTCCAATCAGGATCCGACCCGATTTATCCCCTATCGAATCCGAATTCATCTCCGCCGTAGAATGGTTGGTATTTGACGAAATTCGCGTCATCGTCGCTGGTACCTCCTCTGGCTACTTGCTCATTTACTCCTTGCGTGCTGAATTGATTCATAGGCAGATGATTTATCCTGGACGGGTTTTGAAGTTAAGAGTTCGTGGAACGAAGAAAGATTTGATTCAAGATAATAGTTCATCCTCAGAAGAGTTTTGTCTTATAATGCCAGGTGTCATTGCCCGTTTTGATGGCTCTGTTGTTCAGAATATGCTGCAGAAATGGTTTGAAGAAGCGCATGCTCAACTTTGGAATCAAAAGCAAAAGGGCCAAGATTCTGAGGATTTTGATAATTCTCAACAAAAATTACCTTACCAGTTGTGGAATATCGGTAAGTATGGTACTTGTGCTGATGCAGCCATTACTGGCATAATGCCTCCACCGCTCATGGAACAACAGTCGAGTCAACGTTATTATTGCGCAGTGGCTGTTGGAGACGATGCTGTGATTTCAGCTTACAGACTTTCTGAGGACAAAGGCAGGTCTTTAGTGGGAGCTATCTTGTCTAAAGTTGTACCTGCAACTTTTTCCACTATAGCGTCATTTTCTAAGTTGATTTGGCGGAGTGAACATACTTCTCCAGTGAAATCCCCAAAGAAATTGGAGCAGAAGCCTCAGCCATTTGCTCGTGCTTCACCTCTGACATGTATAAAGGATCATCCTAGGAAAGGTGAAAAGCTAACCTTATCACCAAGTGGTACATTGGCTGCTATAACGGATTCACTAGGTCGCATATTACTCCTTGATACTCAAGCACTTGTGGTGGTTCGCTTGTGGAAGGGATATAGGGATGCCAGCTGTTTATTCATGGAGATGTTGGTGAATAAAGATTTAGCATCATCAAGCTCCACTTGTTATGAATCAATGAAGAGTGACTACTGCTTGTGTTTGGCTATTCATGCACCTAGAAAAGGAATTATCGAGATATGGCAAATGAGAACTGGACCACGTCTTAGAACAATATCTTGTGCAAAAGGCAGCAAAATGTTGCAACCCTCCTATAGGTTTGGTGCATCAATGTCTTCTCCTTATGTTCCTCTAGAAGTTTTCTTGTTAAATGGGGATTCGGGTCAGATATCAGTTTTAAATCGGACATTGGACTCTTGA 1395 0.4358 MGMKRRSYKKELGCIACKELGEVGAGKPGWVVDNPNLLSAIDNHSILLANRSTILLLSWSSDSSQSPIRIRPDLSPIESEFISAVEWLVFDEIRVIVAGTSSGYLLIYSLRAELIHRQMIYPGRVLKLRVRGTKKDLIQDNSSSSEEFCLIMPGVIARFDGSVVQNMLQKWFEEAHAQLWNQKQKGQDSEDFDNSQQKLPYQLWNIGKYGTCADAAITGIMPPPLMEQQSSQRYYCAVAVGDDAVISAYRLSEDKGRSLVGAILSKVVPATFSTIASFSKLIWRSEHTSPVKSPKKLEQKPQPFARASPLTCIKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFMEMLVNKDLASSSSTCYESMKSDYCLCLAIHAPRKGIIEIWQMRTGPRLRTISCAKGSKMLQPSYRFGASMSSPYVPLEVFLLNGDSGQISVLNRTLDS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1682 464 Pfam Rab3 GTPase-activating protein regulatory subunit N-terminus 31 426 IPR032839 -
Mtr8g1682 464 SUPERFAMILY WD40 repeat-like 53 414 IPR036322 GO:0005515
Mtr8g1682 464 PANTHER RAB3-GAP REGULATORY DOMAIN 4 456 IPR026059 GO:0043087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1682 K19937 - gmx:100796204 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1682 8 24857648 24861556 Mtr8g1682 8 24857648 24861556 ECH