Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1678 ATGGCAAACAGGAACCTTGAAAAGATGGCATCCATCGATGCTCAGCTTCGGCAATTGGTTCCTGCAAAAGTGAGTGAGGATGATAAACTGGTTGAGTATGATGCTTTGCTCTTGGACCGTTTCCTTGATATTCTTCAGGATTTACACGGTGAGGATCTCAAGGAAACAGTTCAAGAAGTATATGAACTTTCTGCTGAGTACGAAGGAAAGCATGATCCTCAAAAACTTGAAGAACTTGGAAATCTCATAACAAGTTTGGATGCTGGAGATTCTATTGTTGTTGCCAAATCCTTTTCTCATATGCTTAACTTGGCTAACTTAGCTGAGGAGGTCCAAATTGCTCACCGTCGAAGGATTAAGTTGAAAAAGGGTGATTTTGCTGATGAGAACAATGCAACAACAGAATCAGATATCGAAGAAACTATTAAGAGACTTGTTGGTGAGTTGAACAAGACTCCTCAGGAAGTTTTTGATGCACTTAAAAACCAGACCGTTGATCTCGTTCTTACTGCTCATCCAACGCAATCAATTCGCAGGTCTTTGCTTCAAAAGCATGGAAGGATACGTAATTGTTTAACACAATTGTATGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTCGATGAGGCTCTACAAAGGGAGATCCAAGCTGCCTTCCGTACTGATGAAATCAGGAGGACCCCTCCAACCCCACAAGATGAGATGAGAGCCGGGATGAGCTACTTCCATGAAACAATTTGGATGGGTGTACCTAAATTTCTCCGTCGTGTTGATACAGCTTTAAAGAATATAGGGATTAATGAACGTGTCCCATATAATGCTCCACTTATTCAGTTTTCTTCTTGGATGGGTGGTGATCGTGATGGAAATCCAAGAGTAACTCCTGAAGTGACAAGAGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTACTCCCAAATAGAGGATCTTATGTTTGAACTGTCAATGTGGCGTTGCAATGACGAGCTACGTGTTCGTGCAGAAGAACTTAATAGGTCTTCCAAGAAAGATGCAGTTGCAAAACACTACATAGAGTTTTGGAAAAACATTCCTCCAAATGAACCATACCGAGTGATACTTGGTGAAGTAAGGGACAGACTCTACCAAACTCGTGAGCGTTCTCGCCATTTGTTAGCTCATGGGTACTCGGACATTCCAGAGGAAAATACTTTCACCAATGTTGACGAGTTCTTGGAACCTCTTGAACTCTGTTATAGATCACTTTGTGCTTGTGGTGATCGCGCAATTGCTGATGGAAGTCTTCTAGATTTCTTGAGGCAAGTCTCTACTTTTGGTCTGTCACTAGTGAGGCTTGATATTAGGCAAGAGTCAGACCGTCACACTGATGTGTTGGATGCCATAACCAAACACCTTGAAATTGGCTCCTACCAAGAATGGTCTGAAGATAAACGGCAGCAATGGCTTTTGTCTGAATTGAGTGGCAAACGCCCCTTGTTCGGACCTGACCTTCCCCAAACCGAAGAAATTAAAGATGTTTTGGATACATTTCATGTCATAGCAGAACTACCATCAGACAACTTTGGAGCATATATCATATCAATGGCAACTGCAGCATCCGATGTTCTAGCAGTTGAACTTTTGCAACGTGAATGCCATGTCAAGCAACCATTGAGAGTTGTACCATTGTTTGAGAAGCTTGCAGATCTGGAGGCAGCTCCTGCTGCTTTGGCCCGGTTGTTCTCAATAGATTGGTACAGAAATCGGATCAACGGGAAACAAGAAGTCATGATTGGGTACTCCGATTCAGGTAAAGATGCCGGAAGGTTTTCTGCAGCATGGCAGCTATACAAGGCTCAAGAGGAGCTTATAAAGGTAGCTAAGGAGTATGGTGTTAAACTAACTATGTTCCACGGTCGTGGAGGGACTGTTGGGAGAGGTGGTGGTCCCACTCATCTTGCTATCCTGTCTCAGCCTCCAGATACAATCCATGGATCACTTCGTGTAACTGTACAAGGCGAAGTTATTGAGCAATCATTTGGTGAGGAGCACTTGTGTTTCCGAACACTACAACGTTTCACTGCAGCTACTCTAGAGCATGGAATGCATCCACCAATTTCTCCCAAACCAGAATGGCGTGCGTTGATGGATCAGATGGCTATCATTGCCACAGAGGAATACCGTTCTATGGTATTCCAAGAACCTCGTTTTGTTGAGTATTTCAGGCTGGCTACTCCAGAGTTGGAGTATGGCCGCATGAATATCGGAAGTCGACCTGCAAAGCGAAAGCCAAGCGGAGGTATTGAGACTCTCCGTGCTATTCCTTGGATCTTTGCCTGGACACAAACAAGGTTTCATCTTCCAGTGTGGCTAGGCTTTGGGGCCGCATTCAAGAATGTTATTGACAAGGATATTAGAAATCTTCAAATGCTTCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACTATTGATTTAATTGAAATGGTGTTTGCCAAGGGAGACCCAGGTATTGCTGCTCTGTATGACAGGCTCCTTGTTTCAAACGATCTATGGTCATTTGGGGAGCAGTTGAGAACCAAATTTGAAGAAACCAAGAAACTCCTACTTCAGGTGGCTGCGCACAAGGATCTTCTTGAGGGAGACCCTTACTTAAAGCAAAGACTCCGCCTGCGTGATTCATACATAACTACCTTGAATGTGTGCCAGGCTTACACATTGAAACGCATCCGTGATCCAAACTATAATGTGAAACTACGTCCCCACATCTCTAAAGAGTCTATAGAGATAAGTAAAGCTGCTGATGAACTTGTAACACTGAACCCAACAAGTGAATATGCACCTGGTTTGGAAGACACCCTCATTCTCACCATGAAGGGTATTGCTGCTGGCTTGCAAAACACTGGTTAA 2904 0.4353 MANRNLEKMASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPQKLEELGNLITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRIKLKKGDFADENNATTESDIEETIKRLVGELNKTPQEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWMGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRAEELNRSSKKDAVAKHYIEFWKNIPPNEPYRVILGEVRDRLYQTRERSRHLLAHGYSDIPEENTFTNVDEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITKHLEIGSYQEWSEDKRQQWLLSELSGKRPLFGPDLPQTEEIKDVLDTFHVIAELPSDNFGAYIISMATAASDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPISPKPEWRALMDQMAIIATEEYRSMVFQEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKNVIDKDIRNLQMLQEMYNQWPFFRVTIDLIEMVFAKGDPGIAALYDRLLVSNDLWSFGEQLRTKFEETKKLLLQVAAHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKESIEISKAADELVTLNPTSEYAPGLEDTLILTMKGIAAGLQNTG* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1678 967 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 Pfam Phosphoenolpyruvate carboxylase 36 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 967 IPR015813 GO:0003824
Mtr8g1678 967 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 PRINTS Phosphoenolpyruvate carboxylase signature 280 295 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Mtr8g1678 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Mtr8g1678 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 967 - -
Mtr8g1678 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
Mtr8g1678 967 Gene3D Phosphoenolpyruvate/pyruvate domain 308 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1678 Mtr-Chr8 24808486 24813492 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1678 K01595 - gmx:100820574 1825.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2529 2 38110666 38116291 Mtr8g1678 8 24808486 24813492 PCT
Mtr8g1678 8 24808486 24813492 Mtr2g3186 2 45642925 45648065 PCT