Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1670 ATGATGAGGCCGTCGATACTCAGATCCGTCCAGTCAGCCGTGTCCCGCAGCATAACCCGCCGCGGCTATGCCACCGAACCGGTGCCTGAACGCAAGGTGGCCATTCTCGGTGCCGCCGGTGGGATCGGTCAGCCCCTCTCTCTTCTCATGAAGCTCAACCCTCTCGTTTCAACCCTTTCTCTTTATGATATCGCTGGTACCCCCGGTGTTGCTGCCGATGTTAGCCACATCAACTCCAGATCTCAGGTAACTGGGTATGCAGGTGAAGATGAGCTTGGAAAAGCTTTGGAGGGTGCTGATGTTGTTATAATTCCTGCCGGTGTGCCCAGAAAGCCTGGAATGACTCGTGATGATCTTTTCAACATTAATGCCGGCATTGTTAAATCACTTGCCACTGCTATTTCTAAATATTGCCCCCATGCCCTTGTTAACATGATAAGCAACCCTGTGAACTCAACCGTCCCCATTGCTGCTGAGGTTTTCAAGAAGGCAGGGACATACGACGAGAAGAGATTGTTTGGGGTTACAACTCTTGATGTAGTTAGGGCAAAAACTTTCTATGCTGGGAAAGCTAATGTTCCAGTTGCGGAGGTCAATGTACCTGTTATAGGAGGCCATGCAGGAGTTACTATTCTCCCACTATTTTCCCAGGCATCACCTCAAGCCAATCTGGATGATGATGTCATTAAGGCTCTAACAGCAAGGACACAAGATGGAGGAACAGAGGTTGTGACTGCCAAGGCTGGAAAGGGTTCCGCAACTTTGTCAATGGCTTATGCTGGAGCCATATTTGCTGATGCTTGCCTCAAAGGTCTTAATGGAGTTCCAGATGTTGTTGAGTGCTCGTATGTGCAATCCAATCTCATTGCTGAACTTCCTTTCTTTGCTTCCAAGGTGAGGATTGGGAAGAATGGTGTGGAGGAAATTCTGGGCCTAGGTTCTCTCTCAGATTTTGAGAAACAAGGCCTTGAAAACCTCAAGTCTGAACTTAAGTCATCTATTGAGAAGGGAATCAAATTTGCTTCCCAGTAA 1032 0.4806 MMRPSILRSVQSAVSRSITRRGYATEPVPERKVAILGAAGGIGQPLSLLMKLNPLVSTLSLYDIAGTPGVAADVSHINSRSQVTGYAGEDELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLATAISKYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKANVPVAEVNVPVIGGHAGVTILPLFSQASPQANLDDDVIKALTARTQDGGTEVVTAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECSYVQSNLIAELPFFASKVRIGKNGVEEILGLGSLSDFEKQGLENLKSELKSSIEKGIKFASQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1670 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 174 IPR036291 -
Mtr8g1670 343 ProSitePatterns Malate dehydrogenase active site signature. 175 187 IPR001252 GO:0006108|GO:0016615
Mtr8g1670 343 Gene3D - 30 175 - -
Mtr8g1670 343 CDD MDH_glyoxysomal_mitochondrial 32 341 IPR010097 GO:0006099|GO:0030060
Mtr8g1670 343 PANTHER MALATE AND LACTATE DEHYDROGENASE 5 342 - -
Mtr8g1670 343 SUPERFAMILY LDH C-terminal domain-like 175 341 IPR015955 GO:0003824|GO:0016616
Mtr8g1670 343 Pfam lactate/malate dehydrogenase, NAD binding domain 32 174 IPR001236 GO:0016491
Mtr8g1670 343 PANTHER MALATE DEHYDROGENASE 5 342 - -
Mtr8g1670 343 Gene3D - 176 342 IPR015955 GO:0003824|GO:0016616
Mtr8g1670 343 PIRSF Lac_mal_DH 27 341 IPR001557 GO:0016616|GO:0019752
Mtr8g1670 343 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 176 340 IPR022383 GO:0016616
Mtr8g1670 343 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 32 341 IPR010097 GO:0006099|GO:0030060
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1670 Mtr-Chr8 24731845 24735359 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1670 K00026 - gmx:100777296 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1670 8 24731845 24735359 Mtr8g1670 8 24731845 24735359 ECH