Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g1644 | ATGAGTGGATCGATCGAGCAACCGCCTCCTCTTCCGCCGCCGCAGTCGCCGTCGTTGTCTGATCATTCATTTCAGAATTCTAACTCGAGGAGTGTGTATTCTGGGAGTAATTCTCATCGATTCATGGACCCTGACGTCATCGAAATTCCACCACCACCACCACCATCAACCCATAACTCTTCTAATTTATTGAAGCAAAAACAGCCCATTTTTCCGGATGTGATTGACATCGACAATGATGATGATGACTCAACAGATTTAGTGGTAGTTGGTGAAAAAGTTGTTAACTGTAATAAGGGAAAGACAATTGATTCCGTTCACAATGATTATGGCGATCATCAAACTATGGAAGACTTTGATAATATATATTATCCGCCTGTGATTGACAAATCTGGACCAAGTAGCTGGGTCGAGTCTTCCAACGGTTATGCTTCTGCATCAAAAAACTTAATCAGCATTGATGAGCAAGGTTCTGACCACTCATATGATGATGATGACGACGACGACGACCTCTCTGATCTTTTTATGGATGATTATATGGACGTAGATAATTATACTTTACTACAGGAGCATTTTGACAATGCGAATATACCTCCTGGTATTGAGGCACCCGTCCCTTGGTTGAAAGATTATGATTTAGGTTCGAAGAAGCCTGAAAGTAGTTTATTCCATCCTAGCTTTCATATTCCGCAGTCTGATTCTAAAAATTGTCAAGGCAGTGGCTTATTTCAGCCTACATGGTCATTAGAGCCTATTAAGCCGGAAACCCAAGAACCGTCAGCAGGTAGTACTAGTGTGCAAAGTAAAGTGGAATCTATTGATCACCCTTCCAAAATACAATTACCTCCTCCTTTATTTTCTCAATCTGTCCCTAGTATGAAGAAATTTGATGCTGGACAGAGCAGGAGACGCAAGTTAAAGTTGCCGGTAGGAGTGGAGTCATCTACATCCAATTTGTTTTCAGGACCTTCTGGTTTTAAGAAACCTTATGTTTTTGGTTCTTCAACTAACTTTAGCTCTTTAGGCAATTCGGAGGCCATGAAGCTGCCACATGTAGGTGAATCACCACATTGGAAACTACTTGAAATGGCAAAGAAAGCAGGTGGAACTGGAAGTATCAGTTCACATCAGTCAAATTTCATAGGGCCTGTAAATGGATCATTTCCTTTTTCGGGAACTGAATTTGTAAATCCTTGGTTGAATTCTTCTCATTTTAACCCATATCCAAGTTATACAGCTAATTCAGGTTTTTTTAATCCATTTGTTCCTCTTCATGTCACGCCTGAGCAAATGTTCAATAATCCTTGGGTTCACAATCCTGCAAGAGATGGAAATAATGGCCCAACTGCTGATAGTACTGTTGTTGCCATCTCTGATGAAGCCAGAGATGAAATTCTGAAGAAATTTCAAAACTTCAAGCAATTTGACACTATTGATGACACTTCAGACCATTACTATCTTCACAAAACTTCTTCCACGGAGCAGCATTCCAAGAACTGGGTCAAAAGAATTCAGGAAGAATGGAAGTCATTGGAGAAGGATTTACCAGATTCAATATTTGTCAGAGTTTATGAATCAAGAATAGATCTGTTGAGGGCTGTGATTATTGGAGCAGAGGGAACCCCTTATCATGATGGCCTATTCTTTTTTGATTTTTTCTTTCCCAGTGGCTTTCCCAATGTACCTCCGCTAGTCTACTACCACTCTGGTGGACTTCGACTCAACCCAAATTTATATAATTGTGGCAAAGTTTGTCTTAGCCTACTTAACACCTGGTCTGGCAATAAGAATGAGAAGTGGCTCCCAGGTGTTTCAACAATTTTACAGGTCCTGGTCTCCATACAAGGTCTAATCTTGAATACAATGCCTTACTTTAATGAGCCTGGATATGCACGCCTAAGTGGATCTGCAGAGGGTGAAATGAGATCCCTGCGGTATAATGAGGACACTTTCCTCTTGTCATTGAGGACAATGGTCTATCTGATAAGAAGGCCTCCAAAGAGTTTTGAGGACTTTGTTAAGGGGCACTTCTGCAGCCGAGGTCAGGATATTTTGGTAGCTTGTAAAGCATACATGGATGGTGCTCAGGTTGGTTGTTTGGTCAAAGGTGGGGTTCAGGATGTTGATCAGGGTGACAAGAGCTGCTCAAAGGAGTTTAAGCAGTCTTTACCTGCATATGTGGATATGCTTGTTAAAGAGTTTACACAAGTTGGAGCAAGGGACTGTGAGAAATTCTTGTCTTCATCAACAATAAGCAACAAGCCGTTGGAATAG | 2274 | 0.4116 | MSGSIEQPPPLPPPQSPSLSDHSFQNSNSRSVYSGSNSHRFMDPDVIEIPPPPPPSTHNSSNLLKQKQPIFPDVIDIDNDDDDSTDLVVVGEKVVNCNKGKTIDSVHNDYGDHQTMEDFDNIYYPPVIDKSGPSSWVESSNGYASASKNLISIDEQGSDHSYDDDDDDDDLSDLFMDDYMDVDNYTLLQEHFDNANIPPGIEAPVPWLKDYDLGSKKPESSLFHPSFHIPQSDSKNCQGSGLFQPTWSLEPIKPETQEPSAGSTSVQSKVESIDHPSKIQLPPPLFSQSVPSMKKFDAGQSRRRKLKLPVGVESSTSNLFSGPSGFKKPYVFGSSTNFSSLGNSEAMKLPHVGESPHWKLLEMAKKAGGTGSISSHQSNFIGPVNGSFPFSGTEFVNPWLNSSHFNPYPSYTANSGFFNPFVPLHVTPEQMFNNPWVHNPARDGNNGPTADSTVVAISDEARDEILKKFQNFKQFDTIDDTSDHYYLHKTSSTEQHSKNWVKRIQEEWKSLEKDLPDSIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDFFFPSGFPNVPPLVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGNKNEKWLPGVSTILQVLVSIQGLILNTMPYFNEPGYARLSGSAEGEMRSLRYNEDTFLLSLRTMVYLIRRPPKSFEDFVKGHFCSRGQDILVACKAYMDGAQVGCLVKGGVQDVDQGDKSCSKEFKQSLPAYVDMLVKEFTQVGARDCEKFLSSSTISNKPLE* | 758 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1644 | 757 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
| Mtr8g1644 | 757 | Pfam | Ubiquitin-conjugating enzyme | 503 | 621 | IPR000608 | - | |
| Mtr8g1644 | 757 | PANTHER | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME | 59 | 749 | - | - | |
| Mtr8g1644 | 757 | MobiDBLite | consensus disorder prediction | 252 | 274 | - | - | |
| Mtr8g1644 | 757 | MobiDBLite | consensus disorder prediction | 18 | 38 | - | - | |
| Mtr8g1644 | 757 | PANTHER | UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED | 59 | 749 | - | - | |
| Mtr8g1644 | 757 | ProSiteProfiles | Ubiquitin-conjugating (UBC) core domain profile. | 499 | 659 | IPR000608 | - | |
| Mtr8g1644 | 757 | SMART | ubc_7 | 502 | 659 | - | - | |
| Mtr8g1644 | 757 | MobiDBLite | consensus disorder prediction | 252 | 291 | - | - | |
| Mtr8g1644 | 757 | SUPERFAMILY | UBC-like | 488 | 666 | IPR016135 | - | |
| Mtr8g1644 | 757 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Mtr8g1644 | 757 | CDD | UBCc | 501 | 628 | IPR000608 | - | |
| Mtr8g1644 | 757 | Gene3D | Ubiquitin Conjugating Enzyme | 458 | 739 | IPR016135 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g1644 | Mtr-Chr8 | 24181494 | 24187946 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1644 | 437 | 742 | Miscellaneous Gene Families | AT2G33770 | 47.403 | 4.45e-85 | 287 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g1644 | K10581 | - | ccaj:109805727 | 759.599 |
Event-related genes