Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1623 ATGAGGGGTCCATTAGGTGCAGTGATAGGAAGCTATACATCAAGTGATGGAGTTACTCAAATGGGTGGTGGAATCATTAAGCATAATAGAAAATGTAGAGATATCACTGCTCTTGTTTTCTTTATTGCTTTTTGGATTGCAATGATTGTTAATTCCAGTTTTGGTTTTAACCAAGGAAACCCACTTAGGCTTACTTATGGGCTGGACTACAAAGGTAATGTGTGCGGTGACAAGCATGCACATCCCGGCCTTGGTGAATTGGAGATCAGATATTGGCAGAATCCTAACCAAGTTTATCAGACTGGATTGAAGGATAGCCAATTCAAACTAGTCAATGCTCGTAGCATATGCTTGTCGGAATGCCCTATTCCTGCTGATGATTCTCTTAAATGGGTGTGTGATTATCCTGAAGGAGATATCCGTCTTTCCATGGAAGATTGGATCAAGAGTGACTATGATTATTATCAGTTCCTTACACCTGATATGAGAAACTCCTCTCTTCAACTTCAGGGTCCATGTTATCCTGTTATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAGTTTATTGCTCGACCATCAAATACATCACTGAAGCATTGGGAGCAGATGGGTGGAGTTAGCATCAATGAAGACATTGTTATTGATAAATCAATTCACAAGTCTATTAATTCTCGATCAGCTGTCTTGAAGAGGTACATGGCTGACATAGGAAAGGCATGGCCTGTGCTGATTGTTTGTGGAGGGATTTTACCTCTTTTTCTGTCTGTGATTTGGCTGATGATGATCCGGCATTTTGTTGCTGCAATGCCGTGGATAACAGTGGTTCTCTTTAATGTTCTAATAATAGCAGTCACAATGTTCTTCTACATAAAAGCTGGATGGATTGGAAATGATGCTATTTCTCCCATCATTGGTGAGCATGATCCTTACATTAATGTATTTGGGAGGGAGTTAACTCATCTACGTGCTGTCACTGTACTTATGACCGTTGTCATGGCTGTTTCCGTTCTCACTTCAATTGCTATTGTACGGCGCATCCTTATGGCAACATCTGTCCTCAAGGTTGCTGCAAAAGTAATTGGAGAAGTTCAAGCACTCATAATTTTTCCAATCATCCCATATGCTATTCTTGCCGTGTTTTACATGATTTGGACTTCAGCTGCTCTCCATTTATTCAGCTCTGGCCAGATTGTTCAGAACGACTGCAACTCTAACTGCTGCACGTATGATCTTGTGGCAAAACGGGTGAACTGTGACCGCTGTTGTGGATATAGCATTCATTACACACCACATATTGGAATTTCCATACTTTTTCACCTATTTGGGTGCTATTGGGCCACACAATTTTTCATAGCAAGCTCCTCAACAGTGGTTGCTGGGTCTGTCGCCTCTTATTACTGGGCCCACGGTGAAACATCTCATGAAATTCCATTTCTGTCAGTCTTTTCCTCCATGAAAAGGCTTATGCGTTACAGTCTCGGATCTGTGGCTCTTGGTTCTCTGATAGTGTCATTTGTAGAATCAATCCGGTTTTTGCTTGAATCTCTTCGTCGCAAACTAAAAGTATCTAGCCATATGCATAGCAGCTGGATAGGCAAGGCTGCACACCAATCTTCTCAATGTTTTCTCAGGTGTATTGAGTGGACAATCAAATCAGTAAATCGAAATGCTTATATCATGATTGCTATAACTGGCAACAGTTTCTTTAGTGCGTCTTCTATAGCAACAGATTTGATCATGAATAACATTCTAAAGATTGGGCGTCTTAATGTGATCGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCAAGTTCCGTGTTTGCATTCCTCATGTTAGACACACACAAGTACAGTTCTGGCCATAACAAGACCTCATCCCCACTCTTCCCTGTTGTGGTATGCTGGGCTCTTGGATATACTGTTGCAACACTATTCTTTGCAGTGGTGGAGATGTCAATTGATACAATAGTTCTCTCATTCTGCCAAGATTCTGAAGAACACCAAGGGACAGCACAGTATGCTCCACCCCTTCTCATGGAAACTCTCGGTAACCAAAACGAGACGAATAGACTTACCCAAGGATCACAATGA 2106 0.415 MRGPLGAVIGSYTSSDGVTQMGGGIIKHNRKCRDITALVFFIAFWIAMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAHPGLGELEIRYWQNPNQVYQTGLKDSQFKLVNARSICLSECPIPADDSLKWVCDYPEGDIRLSMEDWIKSDYDYYQFLTPDMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARPSNTSLKHWEQMGGVSINEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLIIAVTMFFYIKAGWIGNDAISPIIGEHDPYINVFGRELTHLRAVTVLMTVVMAVSVLTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPIIPYAILAVFYMIWTSAALHLFSSGQIVQNDCNSNCCTYDLVAKRVNCDRCCGYSIHYTPHIGISILFHLFGCYWATQFFIASSSTVVAGSVASYYWAHGETSHEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLESLRRKLKVSSHMHSSWIGKAAHQSSQCFLRCIEWTIKSVNRNAYIMIAITGNSFFSASSIATDLIMNNILKIGRLNVIGDVILFLGKLCVSLSSSVFAFLMLDTHKYSSGHNKTSSPLFPVVVCWALGYTVATLFFAVVEMSIDTIVLSFCQDSEEHQGTAQYAPPLLMETLGNQNETNRLTQGSQ* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1623 701 Pfam Plasma-membrane choline transporter 328 670 IPR007603 GO:0022857|GO:0055085
Mtr8g1623 701 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 698 - -
Mtr8g1623 701 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 698 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1623 Mtr-Chr8 23774502 23781851 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1623 K15377 - gmx:100815939 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1623 8 23774502 23781851 Mtr8g1623 8 23774502 23781851 ECH