Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1118 ATGAACATGCTGAAAAGTTATTGTGGTAGTAGCTGGTTCTTGAGAGGACCCAATTCACCGGTTTTACCTTTCAACAGCAGGAACACATACTGTAAGGTTCAACCAACAGCCGCGAGACTCGATGTTCGCCTCCAGTCGAACAGCTCAGTTGCGGTAAAACATAGGAAATCGATTGACGATGTACGAAGTCTACGATTCATCACCGCCGTTAAGACTCCATACTTACCTAGTGGAAAATTAGATCTTGAATCATATGATAACTTGGTGAACATACAAATTGCAAACGGTGTTGAAGGTATTCTTGTTGCTGGCTCAACTGGTGAAGGCCAATTAATGACATGGGATGAACAGATAATGCTCATTGCTCACACAGTTAATTGTTTCGGCGACAAAGTTAAAGTTATTGGTAATGCAGGAAGCAACTGCACAAAAGAAGCGATAAACGCAACCGAGCAAGGTTTTGCTGTTGGAATGGATGCAGCACTTCATATAAACCCTTACTATGGAAAAACCTCAAATGCAGGTTTGGTTGCTCATTATAATAGTTTGCTTCCTGTAGGCCCTATCATAATATACAATGTACCTTCAAGGAGTGGTCAAGATATTCCTCCTAGTGTAATTGAAATATTGGCTCAAAATCCAAATTTTGTCGGTGTGAAAGAGTGTGTTGGAAATGAGAGGGTGAAAATGTACACAGATAAAGGAATTGTTGTGTGGAGCGTTGATAGGTTAAGCCATACAGCTAGATGGGATTGCGGGGCTGTTGGAGTTCAATCTGTTGCAAGCAATTTGGTTCCTGGCTTAATAAGGGAACTCATGTTTGGGGGTAAGAATCCTACATTGAATTCAAAGCTTATGACTTTGTTTGATTGGCTTTTTATAGAGCCAAGCCCAATTGCTTTGAACACTGCTCTTGCTCAACTTGGGGTTATCAAGCCTGTTTTCAGGCTTCCATATGTACCTCTTACTTTGGAACAAAGGGTAGGGTTTGTGAATTTGGTGAAGGAAATGGGCAGGCAACATTTCGTTGGAGAAAAAGATGTTCAAGTTCTTGAGGATGATGATTTTATCATAGTTGGTCGATATTAG 1089 0.4086 MNMLKSYCGSSWFLRGPNSPVLPFNSRNTYCKVQPTAARLDVRLQSNSSVAVKHRKSIDDVRSLRFITAVKTPYLPSGKLDLESYDNLVNIQIANGVEGILVAGSTGEGQLMTWDEQIMLIAHTVNCFGDKVKVIGNAGSNCTKEAINATEQGFAVGMDAALHINPYYGKTSNAGLVAHYNSLLPVGPIIIYNVPSRSGQDIPPSVIEILAQNPNFVGVKECVGNERVKMYTDKGIVVWSVDRLSHTARWDCGAVGVQSVASNLVPGLIRELMFGGKNPTLNSKLMTLFDWLFIEPSPIALNTALAQLGVIKPVFRLPYVPLTLEQRVGFVNLVKEMGRQHFVGEKDVQVLEDDDFIIVGRY* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1118 362 PANTHER DIHYDRODIPICOLINATE SYNTHASE 1 362 IPR002220 GO:0016829
Mtr8g1118 362 SMART DHDPS_2 63 338 IPR002220 GO:0016829
Mtr8g1118 362 ProSitePatterns Dihydrodipicolinate synthase signature 2. 192 222 IPR020625 GO:0016829
Mtr8g1118 362 Gene3D Aldolase class I 57 362 IPR013785 -
Mtr8g1118 362 Pfam Dihydrodipicolinate synthetase family 65 336 IPR002220 GO:0016829
Mtr8g1118 362 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE 1 362 - -
Mtr8g1118 362 SUPERFAMILY Aldolase 67 337 - -
Mtr8g1118 362 ProSitePatterns Dihydrodipicolinate synthase signature 1. 99 116 IPR020624 GO:0016829
Mtr8g1118 362 CDD DHDPS 65 327 IPR005263 GO:0008840|GO:0009089
Mtr8g1118 362 PRINTS Dihydrodipicolinate synthase signature 96 117 IPR002220 GO:0016829
Mtr8g1118 362 PRINTS Dihydrodipicolinate synthase signature 132 150 IPR002220 GO:0016829
Mtr8g1118 362 PRINTS Dihydrodipicolinate synthase signature 164 180 IPR002220 GO:0016829
Mtr8g1118 362 PRINTS Dihydrodipicolinate synthase signature 187 204 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1118 Mtr-Chr8 13627756 13629978 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1118 K01714 - gmx:100806626 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1880 7 34876483 34879487 Mtr8g1118 8 13627756 13629978 PCT