Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1092 ATGAACGGCGGTGGTGGAAGTAACTTCCCTCCGCCACAACCTAACGGCGGCGATTTTCTTCTCTCTCTTCTTCAAAAACCCCGCCCTAATCCTCACCCTTCTCAATCCTCAACTACTCAACAATCTCCCATCATCGATCCCGCCGTTGCCATGATGGGTCCCACTATTCCAACCAACGGTCACGATCATCCCAATCATCACCCTCATCACAACCACCACCAGCATCATCAGCATCTTCCACCATGGTCCCACACACCTTCTCCTCACGTATTCGGGTTAACCCATAACCCGTTTCCACTTCAACGGGTACCGGAAACTCATTACTCCAACTTCACCAACGCTAACGGTGCTTCACTCACTGAAGATCTACGAAGATTAGGGTTTCCAATTCAAAGCAACAACAACAATGGTTTCATTCAGCAGCAACAGCATCAACATCAACAACAGGAATTAAAGTTACAGTTTGGTTCTTTACCAACAGTTTCTTATGCTGCTGCTACTTCCCATGATGTTTCTACCAATGGATTTGTTGATAGGAATAAAATTGAAAAAAGAGGTGTTATTGGTGATTTTAGGTTAACTGAACAAATTAGGGTTCCACCACCACCTGGATTTGGGAACAATAAGGGTGATGGTGAATTGGGTGGTGGTAGGAATGTGAGATTAGGGATTGGTGATAGGGGCAATGTGGGTCATGAGTTGAGGCTACCTGATCAGCTTGATCATCCTGGTCCACCTTCTGGGAGTAATCTTCGTTCGGGTTATGATGATGTTGATGCGGTTGGAGAACGGTTAGCTGATTCGTTGTTGCTTGAGGATGAGATAGATGAGAAGAGTGGTAACTCCATGAAACGACGTGGTCCGAAGGAGAAGGATGGTAGATCTTCAGACTCAAGAGGAAATCAATTGCTAAGTCAGCGTGCAAGAACATTTAAAAGACAAATGATGTGCCGCAGGGACATAGATAGTTTTAGTGTTCCTTTCCTTTCAATATATGAGTCCTTAATACCACCAGAAGAAGAAAAACTGAAGCAGAATCAATTGTTAGGGTTATTGGAGAAGTTAGTTTGCAAGGAGTGGCCAATGGCTCGGCTTTATCTCTATGGATCATGTGCTAGTTCTTTTGGTGTTTCTAAAAGCGACATTGATGTTTGCCTTGCTATACAAGACGCTGATGTGGACAAGTCTAAGATTATAATGAAATTGGCTGATATTTTGCAATCAGATAACCTGCAGAATGTTCAGGCATTGACACGAGCAAGGGTTCCTATTGTAAAGCTCATGGATCCGGTTACAGGAATCTCTTGTGATATATGCATCAACAATCTTCTGGCTGTTGTAAATACAAAGCTTCTTCGAGATTATGCAAACATTGATCCAAGGTTACGGCAGCTGGCTTTTATCATAAAACATTGGGCGAAGTCAAGAGGAGTCAATGAAACTTACCATGGGACCTTATCCAGCTATGCGTATGTTTTGATGTGCGTTCATTTTTTACAACAACAACGACCTGCTATCCTTCCATGTTTACAGGGGATGAATCCAACATACTCTGTTAGGGTGGACAATGTTGATTGTGCGTTCTTTGACCAAGTTGAAAAACTTGGTCATTTTGGACGACATAACAAAGACACCATTGCTCATCTTGTGTGGGGCTTTTTCTTTTATTGGGCATACTGTCATGATTATGCAAATTCCGTTATATCTGTACGCACAGGAAGCACAATCAGCAAGCGAGATAAGGATTGGACAAGAAGGATTGGTAATGATCGCCACTTGATATGTATAGAGGATCCTTTTGAAACATCTCATGATTTGGGTCGAGTGGTAGATAAACGCAGCATCAAAGTTCTCAGAGAAGAGTTTGAACGTGCTGCGGATATTATGCAGTACGATCCAAATCCATGTATTAAACTTTTTGAGCCTTATGTTTGTAGTAGTGATTGA 1947 0.4253 MNGGGGSNFPPPQPNGGDFLLSLLQKPRPNPHPSQSSTTQQSPIIDPAVAMMGPTIPTNGHDHPNHHPHHNHHQHHQHLPPWSHTPSPHVFGLTHNPFPLQRVPETHYSNFTNANGASLTEDLRRLGFPIQSNNNNGFIQQQQHQHQQQELKLQFGSLPTVSYAAATSHDVSTNGFVDRNKIEKRGVIGDFRLTEQIRVPPPPGFGNNKGDGELGGGRNVRLGIGDRGNVGHELRLPDQLDHPGPPSGSNLRSGYDDVDAVGERLADSLLLEDEIDEKSGNSMKRRGPKEKDGRSSDSRGNQLLSQRARTFKRQMMCRRDIDSFSVPFLSIYESLIPPEEEKLKQNQLLGLLEKLVCKEWPMARLYLYGSCASSFGVSKSDIDVCLAIQDADVDKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYANIDPRLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCVHFLQQQRPAILPCLQGMNPTYSVRVDNVDCAFFDQVEKLGHFGRHNKDTIAHLVWGFFFYWAYCHDYANSVISVRTGSTISKRDKDWTRRIGNDRHLICIEDPFETSHDLGRVVDKRSIKVLREEFERAADIMQYDPNPCIKLFEPYVCSSD* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1092 648 CDD NT_PAP_TUTase 346 456 - -
Mtr8g1092 648 Gene3D Beta Polymerase, domain 2 345 458 IPR043519 -
Mtr8g1092 648 PANTHER POLY A POLYMERASE CID PAP -RELATED 253 645 - -
Mtr8g1092 648 MobiDBLite consensus disorder prediction 1 84 - -
Mtr8g1092 648 MobiDBLite consensus disorder prediction 272 297 - -
Mtr8g1092 648 Pfam Cid1 family poly A polymerase 546 604 IPR002058 -
Mtr8g1092 648 MobiDBLite consensus disorder prediction 65 79 - -
Mtr8g1092 648 Pfam TUTase nucleotidyltransferase domain 343 438 IPR045100 GO:0016779
Mtr8g1092 648 SUPERFAMILY PAP/OAS1 substrate-binding domain 460 630 - -
Mtr8g1092 648 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 253 645 - -
Mtr8g1092 648 MobiDBLite consensus disorder prediction 28 45 - -
Mtr8g1092 648 Gene3D - 459 627 - -
Mtr8g1092 648 MobiDBLite consensus disorder prediction 272 303 - -
Mtr8g1092 648 SUPERFAMILY Nucleotidyltransferase 324 457 IPR043519 -
Mtr8g1092 648 MobiDBLite consensus disorder prediction 196 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1092 - - cam:101492938 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1092 8 13341189 13347791 Mtr8g1092 8 13341189 13347791 ECH