Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1090 ATGATTCTGTCCCCACATATCAAAACATCAAAATCAATACAACAACCATCCAACTCAACCCAACCTAACAAAGCAAATATGGCAGATCTAAACGAAAGCATAGAAGAATCTCAAGAAAATAATAATCTCCCAAAAGTATTCCTTCATGGTCCACCTGAATTCTCCTTCATCCTTCAACCCAATCCTTCTCATAATTTCCATATCTTAAACCCTTCTTCTCTTCCTCCTCTCCACCAATTCTTATCCCTCAATCCTCACCATGCCTCCTCCATTGCCGCTATTGTTTGTACCGGAGGCTACACCGTCAACGCTGATGTTCTCCAACTTCTCCCCGCCCTCCGTCTTGTCTGCACCCCCAGCGCTGGAACTGATCATATTGATCTCTCCGAGTGTCGGCGTCGGGGAATTCAGGTTGCAGGAGCTGGAAATCTTTTTTCTGAAGATGTGGCGGATATGGCTGTTGCTTTGTTGATTGATGTCAGCAGGAAAATTTCAGCTGCGGATCGGTTCTTGAGAAGACAAGTTCAGAATGTATCTTGGAATTTTCCACTTGGTTCTAAGTTAACAGGAAAAAAGATTGGAATTGTTGGTATGGGAAGAATCGGCTCAGAAGTCGCAAAGAGGCTTGAAGCATTCAGTTGCATGATATCATACAACTCTAGAAACAAAAAACCATTAGTTTCGTACCCTTACTATTCCACTGTCTTAGAGCTTGCAACAGACACCAATGTACTGATTCTATGTTGTGATTTAAACGACCAAACAAGGCACATTGTCAACAAAGAAGTCATGTTGGCATTGGGAAAAGGAGGAATCATAGTGAATGTTGGAAGAGGTGCTCTCATTGATGAAAAGGAATTGTTGAAGTGTTTGATTGAAGATGAAATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAAGACTTCTTTTCATTGGATAATGTTGTCCTTTCACCTCATGCAGCTGTTGTAACTTCTGAGTCTTTGATGGGTATCCGCCAAATTGTGGAACAAAATTTGACAGCATTCTTTTCAAATAAAGCTCCGATTACTCCGGTTATATAG 1080 0.4139 MILSPHIKTSKSIQQPSNSTQPNKANMADLNESIEESQENNNLPKVFLHGPPEFSFILQPNPSHNFHILNPSSLPPLHQFLSLNPHHASSIAAIVCTGGYTVNADVLQLLPALRLVCTPSAGTDHIDLSECRRRGIQVAGAGNLFSEDVADMAVALLIDVSRKISAADRFLRRQVQNVSWNFPLGSKLTGKKIGIVGMGRIGSEVAKRLEAFSCMISYNSRNKKPLVSYPYYSTVLELATDTNVLILCCDLNDQTRHIVNKEVMLALGKGGIIVNVGRGALIDEKELLKCLIEDEIGGAGLDVFENEPHVPKDFFSLDNVVLSPHAAVVTSESLMGIRQIVEQNLTAFFSNKAPITPVI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1090 359 MobiDBLite consensus disorder prediction 1 25 - -
Mtr8g1090 359 Gene3D - 146 330 - -
Mtr8g1090 359 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 38 358 - -
Mtr8g1090 359 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 154 327 IPR006140 GO:0051287
Mtr8g1090 359 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 38 358 - -
Mtr8g1090 359 CDD HPPR 44 350 - -
Mtr8g1090 359 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 86 173 - -
Mtr8g1090 359 Gene3D - 85 352 - -
Mtr8g1090 359 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 92 358 IPR006139 GO:0016616|GO:0051287
Mtr8g1090 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 146 327 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1090 Mtr-Chr8 13322558 13324403 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1090 - K15919 gmx:100777313 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1090 8 13322558 13324403 Mtr8g1090 8 13322558 13324403 ECH