Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1089 ATGGCCAAAGACCTTCCAAAAGTACTTGTTCTTGGTCCACCAACATGTTTCTCCACCTTCGAATCACTCTACTCTCACAAATTCAATTTCCTAAACCCCAAACCCTCAGGCCTATCACTGCAACAATTCATCCTTTCCCACAACCACAACCCATCAACAATTCCCGCCATATTCTGCAGCGCCGCATATTCCATCACCACCGACGTTCTCAACCTTCTTCCCTCGCTCAGTCTCGTCGTTACTTCCAGTGTTGGAACTGATCACATTGACCTTAATGAGTGCCGTCGTCGCGGAATTCAGGTTGCCGGTGCTGGAGGAGTTTTCTCGGAGGATGTGGCTGATGTGGCAGTGGCGTTGCTGATTGCTGTCATGAGGAAGGTGACGGTGGCGAATCGGTATGTGAGGACGCGGCGGGAACGTTCTGATCCTTGGGATTTCCCTCTTGGATACAAGTTATCAGGCAAGCGAGTTGGAATTGTTGGATTAGGAAGTATTGGCATGGAAGTTGCCAAGCGACTCGAGTCATTTGATTGCATTATCTCGTACAACTCTAAGCATCAAAAAACATCAATTTCGTACCCTTTCTATTCCAATGTTATTGATCTTGCAACTTCTAGCGACGCACTTGTGGTATGTTGTGCACTAAACAACCAAACACGACACATAGTAAACAAAGATGTCCTTTTGGCATTAGGAAAAGAAGGGTTTATTGTAAATGTTGGAAGAGGTGGTCTTATTGATGAGAAACAATTGATCAAGTGTTTGATGGAAGGAGAAATTGCTGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTGATGAAAAGCTATTTGCAATGGATAATGTGGTTTTATCTCCACATTCTGCAGCTTTTACTGTTGAATCTACAACGAGTTTGTGTGAACTTGTGGCAGGGAATTTAGAAGCTTTCTTCTTAAATAAGCCACTAATTAGTCCAGTGATGTTGGTTGAGTAA 981 0.4383 MAKDLPKVLVLGPPTCFSTFESLYSHKFNFLNPKPSGLSLQQFILSHNHNPSTIPAIFCSAAYSITTDVLNLLPSLSLVVTSSVGTDHIDLNECRRRGIQVAGAGGVFSEDVADVAVALLIAVMRKVTVANRYVRTRRERSDPWDFPLGYKLSGKRVGIVGLGSIGMEVAKRLESFDCIISYNSKHQKTSISYPFYSNVIDLATSSDALVVCCALNNQTRHIVNKDVLLALGKEGFIVNVGRGGLIDEKQLIKCLMEGEIAGAGLDVFENEPHVDEKLFAMDNVVLSPHSAAFTVESTTSLCELVAGNLEAFFLNKPLISPVMLVE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1089 326 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 54 137 - -
Mtr8g1089 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 56 322 IPR006139 GO:0016616|GO:0051287
Mtr8g1089 326 CDD HPPR 6 313 - -
Mtr8g1089 326 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 291 IPR006140 GO:0051287
Mtr8g1089 326 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 322 - -
Mtr8g1089 326 Gene3D - 109 294 - -
Mtr8g1089 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 292 IPR036291 -
Mtr8g1089 326 Gene3D - 52 317 - -
Mtr8g1089 326 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1089 Mtr-Chr8 13318372 13319683 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1089 - K15919 gmx:100776772 463.766