Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1085 ATGCCGCCAAAGCGAGGGGTTTCCTTCGCTAAGAGCGGAAGCAAAGGAATTCGTTTTCCTATTTTGAGTTTCGTTCTTCTATGTGTTCTTACGCCGGTTGTTTTCTTCTTCGGTCGAGGTTTTCACGTTACTGATCAAGATGATATTTCAGCTGTTGCAAATAGACAGCCAGCTGCCAAATGGAGAGAATGGCGTGCGTTGCAAGACCTTAAATCAACTTTTTCGAAAGAGGTTTTCGATGTTATTGTATCCAGCACAGATGATATGGGGCCTTTGAGTCTTGACAATTTTAGAAAAAATATGTCTGCGTCATGGAGAGTTGTTGGATTAGAGACTTCAAATGCTGCCTATGAGGTAAAGAAACCAACAACACACGTTACACAAGAAAAACCAAAGGTGAAGGAAGGAAGATCTTCAGAGGGTCTTACTCACTGGACTGATAGCCCTACACGACAAGTCCGAAGGAAATTAATAGAAAAAAGGCAGGAAAAGCGTGCTGCTGAGTTGGTAAAGATGGACAATGAAGTAATCGTAAAACTTGAAAATGAAGCTATTGAACGTTCAAGATCTGTTGAGTCAGCCGTACTGGGTAAATACAGCATTTGGAGGAAAGAAATTGAGAATGAAAATGCTGATTCTTCTGTTCGGTTTATGCGGGACCAGATCATTATGGCTAGGGTATATGTGAGTATCGCACAGATGAACAACAAGCTTGAACTGTTGCAAGAGCTGCAGTCTAGGCTCAAAGAGAGTCAACATGCTTTAGGTGATGCAATTGCTGATTCAGATCTTCATCACAGTACACGTCAAGAAATAAAGGCTATGGGCCAAGTTCTGTCAAAGGCACGGGGGCAATTGTATGACAGCAAGTTGGTCACTGGAAAATTGAGAGCAATGCTACAGACAGCTGATGAGCAAGTTAGGAACTTGAAGAAACAAAGCACATTCCTCAGTCAGTTGGCTGCTAAGACCATACCAAGTGGAATTCATTGCTTATCTATGCGCCTCACAATAGATTACTACCTCCTTCCTCCTGAAAAAAGGAAGTTCCCTAGGAGCGAGAACTTGGAGAATCCCAGTCTTTATCATTATGCACTATTTTCAGACAATGTCTTGGCTGCATCCGTCGTTGTCAACTCAGCTGTTACAAATGCAAAGGATCCTTCAAAGTATGTTTTCCACCTTGTTACTGATAAACTCAATTTTGGAGCCATGAACATGTGGTTTCTTTTGAACCCTCCTGGAAAAGCTACAATCCATGTTCAAAATGTAGATGATTTTAAGTGGTTGAACTCATCCTACTGCCCTGTATTGCGGCAGCTTGAATCTGCAAAAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACCACTCTTTCTTCTGGTGCTTCCAATATGAAATATAGAAACCCAAAATATCTCTCGATGCTCAACCATCTTAGATTCTATCTTCCAGAAGTTTATCCTAAATTAGATAAAATCCTTTTTCTTGATGATGACATCGTTGTTCAGAAGGATTTGACAGGATTATGGGAAGTTGATCTTCAGGGGAAAGTAAATGGTGCAGTTGAAACATGTGGTGAAAGCTTTCACCGATTTGACAAATATCTTAACTTTTCAAATCCACATATTGCAAGAAACTTTGATCCAAATGCTTGTGGTTGGGCATATGGCATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGATATCACTGGCATATATCACAAATGGCAAAATATGAATGAAGACAGGGTGCTTTGGAAGCTGGGGACATTACCTCCAGGACTAATGACATTCTATGGGCTGACACATCCACTAAATAAATCGTGGCATGTCCTTGGTTTGGGTTACAGTCCAACTGTAGATCGATCAATGATAGAGAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCGTGGCTAGCAATTGCCATGACAAAGTATCGGTCTTACTGGACTAAATATGTTAAATACAATCATTCCTATCTGCAGAAATGCAAGTTACATGAATAG 2022 0.4055 MPPKRGVSFAKSGSKGIRFPILSFVLLCVLTPVVFFFGRGFHVTDQDDISAVANRQPAAKWREWRALQDLKSTFSKEVFDVIVSSTDDMGPLSLDNFRKNMSASWRVVGLETSNAAYEVKKPTTHVTQEKPKVKEGRSSEGLTHWTDSPTRQVRRKLIEKRQEKRAAELVKMDNEVIVKLENEAIERSRSVESAVLGKYSIWRKEIENENADSSVRFMRDQIIMARVYVSIAQMNNKLELLQELQSRLKESQHALGDAIADSDLHHSTRQEIKAMGQVLSKARGQLYDSKLVTGKLRAMLQTADEQVRNLKKQSTFLSQLAAKTIPSGIHCLSMRLTIDYYLLPPEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSAVTNAKDPSKYVFHLVTDKLNFGAMNMWFLLNPPGKATIHVQNVDDFKWLNSSYCPVLRQLESAKMKEYYFKAGHPTTLSSGASNMKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWEVDLQGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPTVDRSMIENAAVVHYNGNMKPWLAIAMTKYRSYWTKYVKYNHSYLQKCKLHE* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1085 673 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 13 673 IPR029993 GO:0047262
Mtr8g1085 673 MobiDBLite consensus disorder prediction 123 141 - -
Mtr8g1085 673 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 364 670 IPR029044 -
Mtr8g1085 673 MobiDBLite consensus disorder prediction 123 146 - -
Mtr8g1085 673 Coils Coil 293 313 - -
Mtr8g1085 673 Pfam Glycosyl transferase family 8 331 646 IPR002495 GO:0016757
Mtr8g1085 673 SUPERFAMILY Nucleotide-diphospho-sugar transferases 362 670 IPR029044 -
Mtr8g1085 673 Coils Coil 231 261 - -
Mtr8g1085 673 PANTHER HEXOSYLTRANSFERASE 13 673 - -
Mtr8g1085 673 CDD GT8_like_1 362 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1085 Mtr-Chr8 13292723 13300864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1085 6 673 Glycosyltransferase AT3G61130 70.703 0.0 1002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1085 K13648 - gmx:100811181 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1085 8 13292723 13300864 Mtr8g1085 8 13292723 13300864 ECH
Mtr7g1904 7 35156196 35161444 Mtr8g1085 8 13292723 13300864 PCT