Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1083 ATGGGTCCCGAAGCTAACGGCACGGAACCCGAGAAACCAACAGAAGCAGTTCAACTTCAACCCATAAATATTCCACTTCATTTCGTCTTACCCGAAAATCACGCTAACGGCCACGAAACCGTTACTAACAACGAAATTAGTTATGAACAAGGAGGTGTAGATAGCAAAAACGAAGGGTTTATTCATCATCCTCATTCTCTTCTCCCAACGCCAGTTCCACCGGAGATATATCAAACCAACAAAAACAACGAATCTCCGACTAGCTTATCCGTCACCGGAGGAACCATGCCGGATTTCGGCACGTTTATCCGTCAAAGGAGCAATGATTTATCAGCAGCGATTGCGAAACGAGTTTCTTCCTTTCGACAATCGGTTGAAGAGGAGAACGTGACAGAGTTCAATCTTTCAGGACTCAGAGTCGTGGTGAAAACGAAACCTGGAGAAGAAGAAGATGAAAAGATGAAAGGGAGAATCACGTTCTTCTCGAGGTCAAGTTGTAGAGATTGTACCGCAGTGAGAAAATTCTTCAAAGAGAAAAAGCTGAAATTCGTTGAAATCAACGTCGACGTGTTTCGTGAACGAGAGAAGGAGCTACGTGAAAGAACGGGAACGGTTTCGGTGCCGATGATTTTCTTCAACGAGAAGCTAATAGGAGGATTAGTAGCGTTAAATTCGCTTCGAAATAGCGGCGAATTTGAACGGAGGTTGACGGAGATGGTGGTGGAGGAATACGCCGATAACGATGCGCCGGTGCCGCCGGTGTACGGTTGTGATTATGTTGAAGATGATCGGACGGATGAGATGGTTGGAGTTGTCAGGGTTTTAAGGGGGAGATTGTTAGTTCAGGATCGGATTAGGAGGATGAAAATTGTTAAGAATTGTTTTGAAGGGAACGAGTTTGTTGAAGTTGTTGTTCAACACTTCAAATGCGCGCGTAATGAGGCTGTTGAAATCGGAAAAGAGTTATCCAGGAAGCACTTCATCCATAATGTTTTTGGGGAAAATGATTTTGAAGATGGAAATCATTTGTATCGTTTCGTTGAGCATGAACCCTTTATCCACAAATGCTTTAATTTTCGCGGTGCCGTAAATGACAATGAACCAAAGACAGCAGCTTTAATTTGTGACAGGCTAACTAAGATTATGTCTGCCATTCTTGAGTCTTATGCTTCTGATGATAGAAAACATGTTGATTATGCTGCCATTAGCCGAAGCGAAGAATTTCGTAGGTATATAAATCTGACTCAAGATCTGCAGCGAGTTAATATTGTTGAACTATCGGAAAATGAAAAGCTTGCCTTCTTCTTGAATTTGTATAATGCCATGGTCATTCATGCTGTTATTAGCGTCGGGAGTCCAGAAGGTGTAATTGATCGGAGATCCTTCTTCAATGATTTCCTGTATTTGATAGGAGGACATCCTTATTCTCTTGCTATTATTGAAAACGGTATTCTCAGATGTAATCAGAGGTCACCATATTCCTTAATGAAGCCCTTTAGCACTGGAGATAAGCGGTTAGAGGTTGCTCTTGTCAAGTTGAACCCCTTATTTCACTTTGGACTTTGTAATGGTACAAAATCTAGCCCAACCGTGAGGTTCTTTTCACCTCATAGAGTTGTAGATGAACTAAGAGGTGCTGCAAGAGAGTTCTTTGAGAATGATAGAATTGAAGTGGACCTAGAGAAGAGAACTGTCCATCTTGCGCGGATGTTCAAGTGGTTCAGTGGTGATTTTGGACAAGAGAAAGAAGTTCTTAAGTGGATACTTGATTACTTACAACCTAATAAAGCAGGTCTAGTGACACATCTCTTAAGTGATAATGGATCTGTTAATATATCTTACCAGAATTTTGATTGGTCATTAAATTCTTGA 1872 0.4151 MGPEANGTEPEKPTEAVQLQPINIPLHFVLPENHANGHETVTNNEISYEQGGVDSKNEGFIHHPHSLLPTPVPPEIYQTNKNNESPTSLSVTGGTMPDFGTFIRQRSNDLSAAIAKRVSSFRQSVEEENVTEFNLSGLRVVVKTKPGEEEDEKMKGRITFFSRSSCRDCTAVRKFFKEKKLKFVEINVDVFREREKELRERTGTVSVPMIFFNEKLIGGLVALNSLRNSGEFERRLTEMVVEEYADNDAPVPPVYGCDYVEDDRTDEMVGVVRVLRGRLLVQDRIRRMKIVKNCFEGNEFVEVVVQHFKCARNEAVEIGKELSRKHFIHNVFGENDFEDGNHLYRFVEHEPFIHKCFNFRGAVNDNEPKTAALICDRLTKIMSAILESYASDDRKHVDYAAISRSEEFRRYINLTQDLQRVNIVELSENEKLAFFLNLYNAMVIHAVISVGSPEGVIDRRSFFNDFLYLIGGHPYSLAIIENGILRCNQRSPYSLMKPFSTGDKRLEVALVKLNPLFHFGLCNGTKSSPTVRFFSPHRVVDELRGAAREFFENDRIEVDLEKRTVHLARMFKWFSGDFGQEKEVLKWILDYLQPNKAGLVTHLLSDNGSVNISYQNFDWSLNS* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1083 623 Pfam Protein of unknown function, DUF547 425 550 IPR006869 -
Mtr8g1083 623 Gene3D - 264 402 IPR036388 -
Mtr8g1083 623 SUPERFAMILY "Winged helix" DNA-binding domain 266 369 IPR036390 -
Mtr8g1083 623 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 36 623 - -
Mtr8g1083 623 CDD DEP 267 345 - -
Mtr8g1083 623 ProSiteProfiles Glutaredoxin domain profile. 146 243 - -
Mtr8g1083 623 SUPERFAMILY Thioredoxin-like 155 238 IPR036249 -
Mtr8g1083 623 PANTHER F26K24.21 PROTEIN 36 623 - -
Mtr8g1083 623 Gene3D Glutaredoxin 153 240 - -
Mtr8g1083 623 Pfam Glutaredoxin 158 217 IPR002109 -
Mtr8g1083 623 SMART DEP_3 275 348 IPR000591 GO:0035556
Mtr8g1083 623 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 280 346 IPR000591 GO:0035556
Mtr8g1083 623 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1083 Mtr-Chr8 13265853 13272887 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1083 - - gmx:100810111 879.396