Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1079 ATGGCGGACAACACCATCACCTCCCCACTTCTTACATCCGACCATTTAATCCTAACAATCAACTCCACCTCTTCCGACACCGACTCCTCTGTCCCCTCTGACACACGTCAAATCTCCAATCCATTCAACGTTGGAGAGTTGACTGTGCCAGAGGCGATAACTGTGGACCCATTCCACAACTATAAAGCAGGGATTAATGGGTTTTATGAATGGGTGAAAACGTTTTTGTGTATTCCTTTAGCTTTGGTGAGATTGGTGATATTTGGTTTGTGTTTGGCGATTGGTTATGTGGCTACTAAGGTTGCTCTTTATCGTTGGAAAGATAAGGAAAATCCTATGCCTAGGTGGAGATGTAGGATTATGTGGGTCACCAGAATTTCTGCTAGATTCATTCTCTTCTCTTTTGGCTATCATTGGATAAAAAGGAAGGGAAAACCTGCCCGAAGGGAAGTTGCTCCAATAATCGTATCTAATCATGTATCATATATTGAGCCTATCTTCTATTTTTATGAATTATTTCCCACCATTGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACAATCATTAGAGCAATGCAGGTCATATATGTTAACAGGTTCTCACAATCATCAAGGAAGCAGGCTGTTAGAGAAATAAAGAGAAGGGCTTCTTGCGATAGATTTCCTCGAGTACTTTTATTTCCCGAGGGAACGACGACTAACGGCCGGAACCTTATTTCCTTCCAACTCGGTGCATTCATCCCTGGGTACCCAATCCAGCCTATAATTGTACGCTATCCTCATGTGCACTTTGATCAATCTTGGGGCAACGTTTCTTTGGGACAGCTTATGTTCAGGATGTTTACTCAATTCCACAACTTCTTCGAGGTGGAATATCTTCCTGTCATTTCACCCCTAGATGATAAAGAAACTGCTGTGCATTTTCGTAAAAGGGCGAGCCATGCTATTGCAAGTGCATTGAATACTGTCCAAACTGGACATTCTTATGGAGATATAATGCTTCATATGAAAGCCCAAGAAGCAAAACATGAGAACCCCTCGAGTTTTATGGTTGAAATGGCCAAGGTGGAATCATTATTTCATATCAGCAGCTTGGAAGCTGTGGACTTATTGGATAAATTCTTGGCTATGAATCCCGATCCCAGCGGCCGTGTTCAATATCGTGGTTTTTTGAGAGGTTTAAGACTGAAGGCTTGTCCACTTTCTGAAAAGATATTTTCATTCATTGATGTGGAGAAGTATGGGAAAATTACATTCAGACAGTTCTTGTATGGATCTGCACATGTCATGAAGCATCTAGGGTTCAATCAAACTTGTGAAGCAGCCTTTGCTGAGTGTGGCGGTTCTGTAAAGGGCTACATTGTGGAAGACGAATTACGAGATTACATCCAATCTGCTATCCCCAGCTGGAATGAGGACGAGGTCCATGATTTTTTTGCATTATTTGATGACGATAATGATGGAAGAATTTACAAGGATGAATTTCTTGCATGCTTGAGAAGAAATCCTCTTCTCACAGCCCTTTTTACTCCTCAACCGAAGCACAAGGAATCATGTGGTAATGGAGTGGTAGAGATACTGTGA 1593 0.4193 MADNTITSPLLTSDHLILTINSTSSDTDSSVPSDTRQISNPFNVGELTVPEAITVDPFHNYKAGINGFYEWVKTFLCIPLALVRLVIFGLCLAIGYVATKVALYRWKDKENPMPRWRCRIMWVTRISARFILFSFGYHWIKRKGKPARREVAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFSQSSRKQAVREIKRRASCDRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPIIVRYPHVHFDQSWGNVSLGQLMFRMFTQFHNFFEVEYLPVISPLDDKETAVHFRKRASHAIASALNTVQTGHSYGDIMLHMKAQEAKHENPSSFMVEMAKVESLFHISSLEAVDLLDKFLAMNPDPSGRVQYRGFLRGLRLKACPLSEKIFSFIDVEKYGKITFRQFLYGSAHVMKHLGFNQTCEAAFAECGGSVKGYIVEDELRDYIQSAIPSWNEDEVHDFFALFDDDNDGRIYKDEFLACLRRNPLLTALFTPQPKHKESCGNGVVEIL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1079 530 Pfam Acyltransferase 152 257 IPR002123 GO:0016746
Mtr8g1079 530 SUPERFAMILY EF-hand 359 514 IPR011992 -
Mtr8g1079 530 SMART plsc_2 153 263 IPR002123 GO:0016746
Mtr8g1079 530 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 115 324 - -
Mtr8g1079 530 SMART efh_1 477 505 IPR002048 GO:0005509
Mtr8g1079 530 SMART efh_1 404 432 IPR002048 GO:0005509
Mtr8g1079 530 CDD EFh 455 500 IPR002048 GO:0005509
Mtr8g1079 530 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 5 516 - -
Mtr8g1079 530 Pfam EF-hand domain pair 454 504 IPR002048 GO:0005509
Mtr8g1079 530 CDD LPLAT_LPCAT1-like 128 336 IPR045252 GO:0008374
Mtr8g1079 530 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Mtr8g1079 530 PANTHER BNAA03G56890D PROTEIN 5 516 - -
Mtr8g1079 530 Gene3D - 352 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1079 Mtr-Chr8 13172677 13182329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1079 113 306 Acyl Lipid Metabolism Gene Families AT1G80950 32.143 1.92e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1079 K13510 - gmx:100818109 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1079 8 13172677 13182329 Mtr8g1079 8 13172677 13182329 ECH