Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1064 ATGGTTCCTTTCAACTCAAGAAAGGGACGAAAATTAAGCTCAAAAGCCATAGCTGATGCAACTTCATGGTATTGTTCTATTGTTCTTGTAGCACTCATACTTCTAACCATTTATAGAGATAGCTATATGATTCCAAATGATCATGATCACAACATCATAGAAAGCAACCATTTCTTGTTGTCCAAACCATGCGACGAAATCTATGTAGTTGGTGAAGGTGAGACACTTAACACAATTAGTGATAAGTGTAATGATCCTTTTATTGTTGAGAACAATCCTCATATACATGACCCTGATGATGTCTTCCCTGGCCTTGTCATCAAAATTACACCTTCATATAATCATACCTAG 351 0.3618 MVPFNSRKGRKLSSKAIADATSWYCSIVLVALILLTIYRDSYMIPNDHDHNIIESNHFLLSKPCDEIYVVGEGETLNTISDKCNDPFIVENNPHIHDPDDVFPGLVIKITPSYNHT* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1064 116 Pfam LysM domain 68 109 IPR018392 -
Mtr8g1064 116 Gene3D LysM domain 60 116 IPR036779 -
Mtr8g1064 116 PANTHER EMBRYO SAC 1 2 115 - -
Mtr8g1064 116 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 2 115 - -
Mtr8g1064 116 CDD LysM 67 109 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1064 Mtr-Chr8 13049651 13050001 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1064 - - gmx:100306578 156.762