Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1024 ATGGGTGTAGCCTCACATACATTAGAAATAACGGTTATATCCGGGGAAAATATTCATGTAATTGAGGATGCATATGTTGTTGTTCGAGGTGAGTCTCTTAATTGTTACACGACGAAGACAGTGAAAGATAACGATGATTGTAGGAAAAACTCGAGTTTTCTTTCATGGAATGAGAAGTTTTTATTAAACATGCCATTGCATGCAAGGTCAATCACGTTTGAGGTGCAATGCAAGAAGTTTAAAAGTGTTCGTCCTATTGGGGTGGCAAGAATCGCCGTTTCGGATATTCTAAACGGGGCTGAATCGGAAAATTGTTCACGAATTTTGAGTTATAAATTGAGAGATTGGGAAGGGAGGCAAAATGGAGTTATTCATTTTGGTGTGAAGGTGGTTGCGCCAGAGGAAAGATCGGTTACGGTGGCGGAAAAGGAAACACTGGCGGATGGGAAGAGTTATGGTGATCGGTTAACTGGAATTGATGTTGGTACCAAGAACTCTAATGGAGGTGTTATTGGTATTCCTTTTAGGTGGAATTACCCCGGCATTGTTTAA 552 0.4076 MGVASHTLEITVISGENIHVIEDAYVVVRGESLNCYTTKTVKDNDDCRKNSSFLSWNEKFLLNMPLHARSITFEVQCKKFKSVRPIGVARIAVSDILNGAESENCSRILSYKLRDWEGRQNGVIHFGVKVVAPEERSVTVAEKETLADGKSYGDRLTGIDVGTKNSNGGVIGIPFRWNYPGIV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1024 183 Pfam C2 domain 7 103 IPR000008 -
Mtr8g1024 183 Gene3D C2 domain 3 152 IPR035892 -
Mtr8g1024 183 SMART C2_3c 7 105 IPR000008 -
Mtr8g1024 183 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Mtr8g1024 183 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 180 - -
Mtr8g1024 183 PANTHER INGRESSION PROTEIN FIC1 5 180 - -
Mtr8g1024 183 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 131 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1024 Mtr-Chr8 12366261 12367958 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1024 - - mtr:MTR_3g064780 317.39