Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g1023 | ATGGAAGGAAAACAACCAGCACACACATTAGAAATCACCATTATTTCCGGACAAAACATAAGCGTTGATCGAAATTCAAAGGGAGATGATATCTATGTTGTTGTTCGTGCCGAATCTCTCAACTCTTGCACGACAAAAATGGTGAAGGAAAATGAGGGTTTACTTTCATGGAACGAAAAATTCTTATTAGATATTCCATCACATGCAAAATCAGTGACGTTTGAGGTACAATGCAAGAAGTATAAAGGAGCTCATCCAATTGGAGTGGCTAGGATAGCTCTTTCGGATTTTCTTGGTGACGATTCGTCGTTGCAAAGTGGTGTTCAAACTTTGAATTATGGGTTGAGGGATTGGGATGGTAGGAAAAATGGTGTTATTAATTTTAGTGTGAGAAGGGTGACACAAGAAGGTAATTTGTGTGTAGAAAAAGAACAAGGTATCGAGGATGTGGGGTTGAAGGATGAGAAGAATTCAAATCATGTTGTCATTGGGATTCCAGTTTTGGGTTTTTTGTTTCTCTTAGGTTATTCTCTTTTCTCTTTTGTCCGTCGAAAGTAA | 558 | 0.3817 | MEGKQPAHTLEITIISGQNISVDRNSKGDDIYVVVRAESLNSCTTKMVKENEGLLSWNEKFLLDIPSHAKSVTFEVQCKKYKGAHPIGVARIALSDFLGDDSSLQSGVQTLNYGLRDWDGRKNGVINFSVRRVTQEGNLCVEKEQGIEDVGLKDEKNSNHVVIGIPVLGFLFLLGYSLFSFVRRK* | 186 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1023 | 185 | Gene3D | C2 domain | 6 | 132 | IPR035892 | - | |
| Mtr8g1023 | 185 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 5 | 133 | IPR035892 | - | |
| Mtr8g1023 | 185 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Mtr8g1023 | 185 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 185 | - | - | |
| Mtr8g1023 | 185 | PANTHER | C2 DOMAIN PROTEIN | 6 | 185 | - | - | |
| Mtr8g1023 | 185 | Pfam | C2 domain | 9 | 99 | IPR000008 | - | |
| Mtr8g1023 | 185 | SMART | C2_3c | 9 | 106 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g1023 | Mtr-Chr8 | 12363414 | 12364289 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g1023 | - | - | gmx:100810274 | 193.356 |