Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1022 ATGGGTGTAGCCTCACGCACATTAGAAATCACGGTTATATCCGGCGAAAATATTCATGTAACCGAAGATGCATACGTTGTCGTTCGAGGTGAGTCTCTTAATTGTTACACAACGAAGACGCTGAAAGATAACAACGATAATTGTGGAAAAAATTCGAGTTTCCTTTCATGGAATGAAAAGTTTTTGTTGAACATGCCATTGCATGCAAGGTCAATTACGTTTGAGGTGCAATGCAAGAAGTTTAAAAGTGTTCGTCCTATTGGGGTAGCAAGAATTGGCGTTTCGGATTTTCTCAATGGCGCCGTGCCGGAAAATTGTTCGCAAATTTTGAGTTATAAATTGAGGGATTGGGAAGGGAGGCAAAATGGAGTTATTCATTTCAGTGTGAGGGTGGTTGTGCCGGAGGAAAGATCAGTTACCGTGGCGGAGAAGCAAACGGTGATGCATGGAAAGAATTGTGGTGGCCGGTTAACTGGAATGGATGTTGGTGTCAAGAACTGTAATGGTGTTGCTATTGGTTTTCCCTTTTGGTGGAATTACCCTAACATTATTTAA 555 0.418 MGVASRTLEITVISGENIHVTEDAYVVVRGESLNCYTTKTLKDNNDNCGKNSSFLSWNEKFLLNMPLHARSITFEVQCKKFKSVRPIGVARIGVSDFLNGAVPENCSQILSYKLRDWEGRQNGVIHFSVRVVVPEERSVTVAEKQTVMHGKNCGGRLTGMDVGVKNCNGVAIGFPFWWNYPNII* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1022 184 Pfam C2 domain 7 104 IPR000008 -
Mtr8g1022 184 Gene3D C2 domain 3 152 IPR035892 -
Mtr8g1022 184 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Mtr8g1022 184 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 181 - -
Mtr8g1022 184 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 131 IPR035892 -
Mtr8g1022 184 PANTHER INGRESSION PROTEIN FIC1 5 181 - -
Mtr8g1022 184 SMART C2_3c 7 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1022 Mtr-Chr8 12361493 12362366 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1022 - - mtr:MTR_3g064780 293.123