Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g1020 | ATGGGTGTAGCCTCACGCACATTAGAAATCACGGTTATATCCGGCGAAAATATTCATGTAACCGAAGATGCATACGTTGTCGTTCGAGGTGAGTCTCTTAATTGTTACACAACGAAGACGCTGAAAGATAACAACGATAATTGTGGAAAAAATTCGAGTTTCCTTTCATGGAATGAAAAGTTTTTGTTGAACATGCCATTGCATGCAAGGTCAATTACGTTTGAGGTGCAATGCAAGAAGTTTAAAAGTGTTCGTCCTATTGGGGTAGCAAGAATTGGCGTTTCGGATTTTCTTAATGGCACCGTGCCGGAAAATTGTTCGCAAATTTTGAGTTATAAATTGAGGGATTGGGAAGGGAGGCAAAATGGGGTTATTCATTTTAGTGTGAGGGTGGTTGTGCCGGAGGAAAGATCGGTTACCGTGGCGGAGAAGCAAACGGTGATGCATGGAAAGAATTGTGGTGGCCGGTTAACTGGAATGGATATTGTTGGTGTCAAGAACTCTAATGGTGTTGCTATTGGTTTTCCCTTTTGA | 534 | 0.4195 | MGVASRTLEITVISGENIHVTEDAYVVVRGESLNCYTTKTLKDNNDNCGKNSSFLSWNEKFLLNMPLHARSITFEVQCKKFKSVRPIGVARIGVSDFLNGTVPENCSQILSYKLRDWEGRQNGVIHFSVRVVVPEERSVTVAEKQTVMHGKNCGGRLTGMDIVGVKNSNGVAIGFPF* | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1020 | 177 | Pfam | C2 domain | 7 | 104 | IPR000008 | - | |
| Mtr8g1020 | 177 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Mtr8g1020 | 177 | Gene3D | C2 domain | 3 | 152 | IPR035892 | - | |
| Mtr8g1020 | 177 | PANTHER | BON1-ASSOCIATED-LIKE PROTEIN | 5 | 177 | - | - | |
| Mtr8g1020 | 177 | PANTHER | INGRESSION PROTEIN FIC1 | 5 | 177 | - | - | |
| Mtr8g1020 | 177 | SMART | C2_3c | 7 | 106 | IPR000008 | - | |
| Mtr8g1020 | 177 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 131 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g1020 | Mtr-Chr8 | 12345809 | 12346651 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g1020 | - | - | mtr:MTR_3g064780 | 273.092 |