Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1019 ATGGTTGTGACTTCACAAACATTAGAAATTACGGTTATATCTGGTGAAAATATTCATGTAACGGAGGATGCATACGTTGTTGTTCGAGGTGAGTCTCTTAATTGTTACACAACAAAAACGGTGAAAGATAATGATAATTGTGGGAAAAACTCGAGTTTTCTTTCATGGAATGAGAAGTTTTTGTTGAACATGCCATTGCATGCAAGGTCAATCACTTTTGAGGTGCAATGCAAGAAGTTTAAAAGTGTACGTCCTATTGGGGTGGCAAGAATTGCTCTTTCGGATTTTCTCAATGGCATCGCGCCGGAAAATTGTTTGCAAATTTTGAGTTATAAATTGAGGAACTGGGAAGGGAGGCAAAATGGAGTTATTCATTTCAGTGTGAGGGTGGTTGTGCCGGAGAAAACATCGGCTACCGTGGCGGTTGAAAAGCAGACTGTCGCGGATGGAAAGAATTATGGTGGTCGGTTAACTGGAATGGATGTTGGTACCAAGGACTCTAATGGTGTTGCTATTGGTATTCCGTTTTGGTGGAATTACCCAAACATTATTTAA 555 0.4018 MVVTSQTLEITVISGENIHVTEDAYVVVRGESLNCYTTKTVKDNDNCGKNSSFLSWNEKFLLNMPLHARSITFEVQCKKFKSVRPIGVARIALSDFLNGIAPENCLQILSYKLRNWEGRQNGVIHFSVRVVVPEKTSATVAVEKQTVADGKNYGGRLTGMDVGTKDSNGVAIGIPFWWNYPNII* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1019 184 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 5 181 - -
Mtr8g1019 184 Gene3D C2 domain 3 153 IPR035892 -
Mtr8g1019 184 Pfam C2 domain 7 99 IPR000008 -
Mtr8g1019 184 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 130 IPR035892 -
Mtr8g1019 184 SMART C2_3c 7 105 IPR000008 -
Mtr8g1019 184 CDD C2_SRC2_like 7 126 IPR044750 GO:0006952
Mtr8g1019 184 PANTHER INGRESSION PROTEIN FIC1 5 181 - -
Mtr8g1019 184 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1019 Mtr-Chr8 12342939 12344013 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1019 - - mtr:MTR_3g064780 301.212