Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1013 ATGGCTACTACCACCTCCGCTTCATTCTCTCGCCTCTCCATTCCCCCAAAATCACCCTCTCAACCACAATTCCTCATCTTCACCTCCCCATTTCAAACTAAATCCCCCTCATCTCGAACCCGGTTCACATGCTCCGCCGGTGAAACCGGTTTATTCACAAAACTCGGCCGGTTACTAAAAGAAAAAGCAAAAAGCGATGTAGAGAAACTCTTCTCCGGTTTCTCAAAAACTCGTAACAATCTCTCCGTCATTGATGAGCTTCTTCTTTATTGGAATCTCTCTGATACTGATAAAGTTCTTGATGAACTTGAAGAGGCTTTATTAGTTTCTGATTTTGGACCGAAAATTACTATTAAGATTGTGGAGAATTTAAGGGAGGATATACTTTCTGGTAAGCTTAAATCAGGGAGTGAGATTAAGGAAGCACTGAAGAAGAATGTTTTGGATTTGTTAAGCAACAAGGGGAGTAAAACTGAACTTCAACTTGGATATAGGAAACCAGCCGTAATAATGATAGTTGGTGTTAATGGTGGTGGGAAGACAACTTCTTTGGGAAAGCTGGCTTATAGATTGAAGAATGGAGGTGCTAAGATACTGTTGGCAGCTGGTGATACATTCAGAGCAGCTGCTAGTGATCAGCTAGAAATATGGGCTGAAAGGACTGGGTGTGAGATTGTTGTAGCTGAGTCTGAGAAATCCAAAGCATCAGCAGTGCTTTCACAAGCTGTAAAAAGAGGAAAAGAGCTAGGTTATGATATTGTATTATGTGATACATCTGGACGTTTACACACCAATTACAGGCTAATGGAAGAGTTAATTTCTTGTAAAAAGGCTGTTGCTAAAGTAGTTGCTGGTGCACCCAATGAAATCTTACTGGTTCTGGATGGAACTACTGGTTTGAATATGTTGCCACAAGCCAGAGAATTCAATGAAGTTGTGGGTGTAACTGGTTTAATTTTGACCAAACTGGATGGTTCTGCAAGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGAATCCCTGTAAAATTTGTCGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCCTTTGATGCAGAGGCCTTTGTCAATGCCATTTTTCTGTAA 1110 0.4153 MATTTSASFSRLSIPPKSPSQPQFLIFTSPFQTKSPSSRTRFTCSAGETGLFTKLGRLLKEKAKSDVEKLFSGFSKTRNNLSVIDELLLYWNLSDTDKVLDELEEALLVSDFGPKITIKIVENLREDILSGKLKSGSEIKEALKKNVLDLLSNKGSKTELQLGYRKPAVIMIVGVNGGGKTTSLGKLAYRLKNGGAKILLAAGDTFRAAASDQLEIWAERTGCEIVVAESEKSKASAVLSQAVKRGKELGYDIVLCDTSGRLHTNYRLMEELISCKKAVAKVVAGAPNEILLVLDGTTGLNMLPQAREFNEVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1013 369 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 67 144 IPR036225 -
Mtr8g1013 369 SMART AAA_5 166 339 IPR003593 -
Mtr8g1013 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 367 IPR027417 -
Mtr8g1013 369 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 342 355 IPR000897 GO:0005525|GO:0006614
Mtr8g1013 369 Gene3D - 159 368 IPR027417 -
Mtr8g1013 369 CDD FtsY 168 367 - -
Mtr8g1013 369 Gene3D - 57 158 IPR042101 -
Mtr8g1013 369 PANTHER SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA 30 368 - -
Mtr8g1013 369 Pfam SRP54-type protein, GTPase domain 167 368 IPR000897 GO:0005525|GO:0006614
Mtr8g1013 369 SMART SRP54_N_2 70 151 IPR013822 GO:0005525|GO:0006614
Mtr8g1013 369 MobiDBLite consensus disorder prediction 1 21 - -
Mtr8g1013 369 SMART SRP54_3 167 369 IPR000897 GO:0005525|GO:0006614
Mtr8g1013 369 TIGRFAM ftsY: signal recognition particle-docking protein FtsY 96 368 IPR004390 GO:0006614
Mtr8g1013 369 PANTHER BNAA04G26420D PROTEIN 30 368 - -
Mtr8g1013 369 Pfam SRP54-type protein, helical bundle domain 96 145 IPR013822 GO:0005525|GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1013 Mtr-Chr8 12292548 12300721 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1013 K03110 - gmx:100791073 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1013 8 12292548 12300721 Mtr8g1013 8 12292548 12300721 ECH