Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0996 ATGGAAGAATATACAGAAAGGTATGCAGTGGTGACTGGAGCAAACAAAGGGATTGGATTTGAGATAGTTAAGCAGTTAGCTTCAGCTGGAATCAAAGTGGTGCTTACTGCAAGAGATGAGAAAAGAGGTCTTCATGCTTTGGAAACACTCAAAGCCTCTGGTTTATCTGATTTTGTTGTATTTCATCAACTAGATGTTGCTGATGCTGCAAGTGTAGCTTCTCTTGCGGAATTTGTCAAATCTCGATTTGGCAAACTTGATATTCTGGTTAACAATGCTGGGATTGGTGGAATTGAAATCAACGACGGCGATTTATACACTAAACTAATCATGACAAAGGGGGCGGCACTATCTGATGAAGAATCGAGAAGGGTAATAACACAAACACTTGAGTCAGCTAAAGAATGCATTCAAATAAATTATTATGGGGCTAAAAGAACATTTGAATACCTTCTTCCTCTCCTTCAATTATCTGATTCACCAAGAGTAGTCAATGTATCATCGAGAGCAGGCACGATGGAGTATGTATCAAATGAATGGGCTAAAGGAGTGTTCAGTGATGTTGAAAACCTTACAGAACAGAGAATAGATGAAGTAATAAAGGAGTTAATCAAAGATTTTGAACAAGGGTCCTTAGAAAGGAAAGGTTGGCCTAGGCATTTAGCTGCCTATATTGTTGCTAAAGCTTCTATGAGTACCTACACAAGAATTACTGCAAAGAAGTATCCTAACTTCTGCATCAATTGTGTTTGCCCTGGTTATGTCAAAACCGATATAACTGCTAATACCGGTCTCTTCACAGTAGAAGAAGGTGCTGCTCATCCGGTTAGGTTAGCACTACTTCCCGATGGTAGTCCATCTGGCCTCTTCTATAGCCAGAATAAAGTTATTTCATTTTGA 900 0.3922 MEEYTERYAVVTGANKGIGFEIVKQLASAGIKVVLTARDEKRGLHALETLKASGLSDFVVFHQLDVADAASVASLAEFVKSRFGKLDILVNNAGIGGIEINDGDLYTKLIMTKGAALSDEESRRVITQTLESAKECIQINYYGAKRTFEYLLPLLQLSDSPRVVNVSSRAGTMEYVSNEWAKGVFSDVENLTEQRIDEVIKELIKDFEQGSLERKGWPRHLAAYIVAKASMSTYTRITAKKYPNFCINCVCPGYVKTDITANTGLFTVEEGAAHPVRLALLPDGSPSGLFYSQNKVISF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0996 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mtr8g0996 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Mtr8g0996 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Mtr8g0996 299 Pfam short chain dehydrogenase 8 176 IPR002347 -
Mtr8g0996 299 Gene3D - 2 299 - -
Mtr8g0996 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 298 - -
Mtr8g0996 299 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mtr8g0996 299 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mtr8g0996 299 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Mtr8g0996 299 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Mtr8g0996 299 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Mtr8g0996 299 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 298 - -
Mtr8g0996 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 285 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0996 Mtr-Chr8 12070460 12073141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0996 9 171 Miscellaneous Gene Families AT2G29150 34.146 3.52e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0996 K15095 - gmx:102663482 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0996 8 12070460 12073141 Mtr8g0996 8 12070460 12073141 ECH