Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0942 ATGGAGCATTTAGATGACAGGGAAGTGTCAGAAAATAATGTTGATGAAGTAGAAGTCACTAATAATACTCCATTGATTTGTGGTCTTCCAGATGATATTTCTCTTTTGTGTCTGGCAAGAGTGCCTAGAAAATATCATTCGGTCCTGAAGGCTGTTTCAAAAAGATGGAAGGACTTAGTTTGCAGCGAAGAGTGGCTTTATTATCGTAGAAAGCATAAACTTGATGAGACGTGGATCTATGCTTTGTGCAGGGATAAATTGGATCATGTTTACTGCTATGTTTTGGATCCTACCTCGTCAAGAAAATCCTGGAAGCTCATTCATGGGGTTCCACCTCACGTAATGAAAAGGAAAGGAATGGGTTTTGAAGCTTTGGGAAATAAGCTCTTCTTATTGGGTGGCTGTGGCTGGTCTGAAGATGCTACTGACGAAGTTTATTCATACAATGCTTCTTTGAACTTGTGGGTTGAAGCTGCTTCCTTGTCAACTGCTAGGTGCTACTTTGCTTGTGAAGCAATGGACGAAAAACTATATGCTATTGGCGGCATTGGTTCAAATTCAAGTGATCCTCAATCTTGGGATACTTTTGATCCTTGCACAAATGGTTGGACATCTCACAGAGATCCTAATATCGTTCCCGAAATTGAAGATTCAATGGTTATGAACGGCAAAATATACATCCGAGGTGGCGAATCTCCTTTAACACCTCATGTGTATGCCGTTGTATACGAACCATCAAATGGCACATGGCAGCATGCAGACACCGACATGGTTTCAGGATGGAGAGGTCCTGCAGTTGTTGTTGACGGAATCCCTTTTGTTTTGGATCAGAGTTCGGGTACTAGGTTGACGATGTGGCATAAAGAGAGACGCGAGTGGATACTGGTCTGTAAGTTGTCACCTTTGCTTACAAGACCACCCTGCCAACTTGTTGCAGTTGGTAAAAGCATTTATATTATTGGAAAAGGGCTTAGCACTGTGGTTGTTGATGTTGGTGATATTGGAAATATGGGAAGGGCGATAACAGGTTCTTCTATACCGAAATTAGTCTCTGATTACAATGTAATTAGTTGTAAATGCTTATCAATCTGA 1092 0.413 MEHLDDREVSENNVDEVEVTNNTPLICGLPDDISLLCLARVPRKYHSVLKAVSKRWKDLVCSEEWLYYRRKHKLDETWIYALCRDKLDHVYCYVLDPTSSRKSWKLIHGVPPHVMKRKGMGFEALGNKLFLLGGCGWSEDATDEVYSYNASLNLWVEAASLSTARCYFACEAMDEKLYAIGGIGSNSSDPQSWDTFDPCTNGWTSHRDPNIVPEIEDSMVMNGKIYIRGGESPLTPHVYAVVYEPSNGTWQHADTDMVSGWRGPAVVVDGIPFVLDQSSGTRLTMWHKERREWILVCKLSPLLTRPPCQLVAVGKSIYIIGKGLSTVVVDVGDIGNMGRAITGSSIPKLVSDYNVISCKCLSI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0942 363 SUPERFAMILY Kelch motif 89 324 IPR015915 GO:0005515
Mtr8g0942 363 Pfam Kelch motif 164 194 IPR006652 GO:0005515
Mtr8g0942 363 Pfam Kelch motif 117 162 IPR006652 GO:0005515
Mtr8g0942 363 SMART kelc_smart 128 175 IPR006652 GO:0005515
Mtr8g0942 363 Gene3D - 70 336 IPR015915 GO:0005515
Mtr8g0942 363 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 13 347 - -
Mtr8g0942 363 Pfam F-box domain 27 62 IPR001810 GO:0005515
Mtr8g0942 363 SMART fbox_2 29 69 IPR001810 GO:0005515
Mtr8g0942 363 SUPERFAMILY F-box domain 24 79 IPR036047 GO:0005515
Mtr8g0942 363 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 13 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0942 Mtr-Chr8 11577834 11581252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0942 29 304 Miscellaneous Gene Families AT4G33900 25.676 5.27e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0942 - - gmx:100798211 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0942 8 11577834 11581252 Mtr8g0942 8 11577834 11581252 ECH