Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0939 ATGTCATTTATCTGTGGGCTTCCTATACTTGAGTGTGTTTATTGTCTGGGTTGTACTCGTTGGGCTTGGAAAAAATGTCTATACACTGCAGGCTACGAGAGTGAAAATTGGGGCCTAGCTACTGCAGAAGAGTTTGAGCCTATACCACGAATTTGTCGCACAATCTTAGCTGTTTACGAAGATGATATTCGTAACCCTCAGTGGGCTCCCGAAGGTGGTTATGGCATTAATCCTGATTGGATTGTCTTGCGGAAGGATTACGGGGATAACCAACGTTGTGTTACTCCGTACATGATATACCTTGATCATGATCGCTCGGAAATTATACTGGCTGTTAGTGGACTCAATTTAGCAAAGGAAAGTGATTACATCGTTTTGCTTGATAACAAGCTTGGACAAACGGAATTTCATGGTGGATATGTTCATAATGGGTTATTGAAGGCAGCGGATTGGGTTTTTGATGCGGAATGGGAGGTTCTGAGGAAGTTAATAGCGGAAAATCCAACTTACATGTTGACGTTTATTGGACATTCACTTGGTGCTGGGGTGGTGGCGTTATTGACAATGATAGCGCTTCATAATCGCGACAAATTGGGGATACAGAGAGACAGGGTAAAATGCTACTCCATTGCTCCTGCCCGATGTATGTCTCTCAATTTGGCTGTAAGATACGCGGATGTGATCAATTCTATCGTACTACAGGACGATTTTTTACCCCGGACAACCACTGCTCTGGAAAGCGTCTACAAGTCACTTTTGTGTTGGCCTTGTTTATTGTGTCTCATGTGCTTAAAGGATACATGCACACTGGAAGAGAAGAAACTTAGAGACCCAAGGCGTCTGTATGCACCTGGTCGTCTCTATCACATTGTCGAGCGAAAGCCCTTCAGGTTAGGAAGATTTCCACCCATTGTTAGGACAGCAGTACCTGTTGATGGGAGGTTTGATCATATAGTTCTTTCTTGCAATGCAACTTCTGACCATGCCATCCTTTGGATTGAGAAGGAATCTCGACGGGCTCTTGATTTAATGCTAGAGAAAGATCGGCATATGGAGATTCCGGCAGCGCAAAAGATGGTGAGGCAAGAATCTCTAGCTCGCGAACACAGCGAAGAGTACCGTGCAGCCCTTCGGAGGGCAGTTGCTTTGGATATTCCTCAAGCATACTCACCTTCCTCATATGGAACATTTCATGAAATTGATGCTGAGGAAGATTCTGGAAGATCTAGTGGCAAAGACTCTTCCTTGTCTCATAACAAACGATCAGAAAGTTGGAATGAATTTGTCGGACGCATGTTTGACGTGGACGACACAGGTCATATGGTGTTCAAGAAGACACCTCCTTAA 1347 0.4432 MSFICGLPILECVYCLGCTRWAWKKCLYTAGYESENWGLATAEEFEPIPRICRTILAVYEDDIRNPQWAPEGGYGINPDWIVLRKDYGDNQRCVTPYMIYLDHDRSEIILAVSGLNLAKESDYIVLLDNKLGQTEFHGGYVHNGLLKAADWVFDAEWEVLRKLIAENPTYMLTFIGHSLGAGVVALLTMIALHNRDKLGIQRDRVKCYSIAPARCMSLNLAVRYADVINSIVLQDDFLPRTTTALESVYKSLLCWPCLLCLMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRLGRFPPIVRTAVPVDGRFDHIVLSCNATSDHAILWIEKESRRALDLMLEKDRHMEIPAAQKMVRQESLAREHSEEYRAALRRAVALDIPQAYSPSSYGTFHEIDAEEDSGRSSGKDSSLSHNKRSESWNEFVGRMFDVDDTGHMVFKKTPP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0939 448 CDD Lipase_3 44 240 - -
Mtr8g0939 448 Pfam Lipase (class 3) 119 243 IPR002921 GO:0006629
Mtr8g0939 448 Gene3D alpha/beta hydrolase 40 252 IPR029058 -
Mtr8g0939 448 MobiDBLite consensus disorder prediction 401 421 - -
Mtr8g0939 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Mtr8g0939 448 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Mtr8g0939 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Mtr8g0939 448 SUPERFAMILY alpha/beta-Hydrolases 43 243 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0939 Mtr-Chr8 11546392 11551716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0939 1 445 Miscellaneous Gene Families AT4G00500 65.256 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0939 - - gmx:100800227 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0939 8 11546392 11551716 Mtr8g0939 8 11546392 11551716 ECH