Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0935 ATGGACAATTCATCAAATTTTGACTCAACTTCTTCTGATCAAAATGATCATTCAATCAGTGAAACTCCTGAGTACTCTCCATTCAGTGGTGATTCTTTCGCGTATTGTCGGAGTAACTCTGAAGTATCAAACTTGTCTGAGACTATTGATGATAATAGCTATGCTAGTGACCCTTCACCTTCACCATGGATGAATGTGAAACATGGAGCTGCTCTTTCAAGGTTAGGAATGAAGCAGAGAAAGCATTCATTGGGTGAGAAATCTGATGATCTTGATCTCTTGGAGTCAGAGCTTGAAATGATGAAGGAAAGATTTTCTAAGCTTCTTTTGGGGGAAGATATGTCTGGAGGTGGTAAAGGTGTTTGCACTGCAGTTACAATATCAAATTCAATTACCAATCTCTATGCAACTGTATTTGGACAAAATTTGAAGTTGGAGCCTCTAAAGCCTGAGAAGAAAGCTATGTGGAAAAGAGAAATGAATTGTCTTATGTCTGTGTGTGATTACATAGTAGAATTTGCACCAACTGCACAATACTTGGATGATGGTACAATTGTGGAGATGATGACAAGTAGACCAAGGGCAGATATTTATATAAACCTTCCAGCTCTACAGAAGCTTGACACGATGCTTATAGAAATCTTTGATAGTTTCCAGGATACTGAATTTTGGTATGCAGAACAAGGGAGCATGTCAGGGAATTCGAACCGTAGTTCACATTCGAATGCAGGTTCGAAGGCAGGCTCGTTTCGAATTATTGCTCAAAGAAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCACACTGGTGGCCTCTCTGATAAGTCAAGGAAGCATTTGATTGAGAAAAGAGATTGTGCTAATCAAATTCATAAAGCAGCTATGGCAATAAATAGCAGTGTTCTTGCAGAGATGGACATTCCAGAAACATACATGGCAAATCTTCCAAAGAGTGGAAGATCAAGTCTAGGAGACACAATTTATCGGTATATGCATTCTGGAGACAAGTTCTCACCAGGCAACCTTCTTGACTGTCTCAAAATAAGAACTGAACATGAAGCACTTGAACTAGCAGATAGAGTTGAATCTTCGATGTATACATGGAGACGTAAATCTTGCCTAAGCCATTCAAAATCATCATGGAACAAAGTAAAGGAACTCATGGCTGAAACTGACCATAGTGATAAAAACTATCTCTTAGCTGAGAGAGCTGAGACTTTATTGTTTTTCTTGAAACAAAGATATCCTGAACTTTCACAAACCTCCTTGGACACATGCAAGATTCAATACAACCAGGATGTAGGGAAAGCAGTACTAGAAAGCTACTCAAGAGTATTAGAAGGCTTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCTTTGTGCAGATAAATCTATGAGGAACTAA 1413 0.3878 MDNSSNFDSTSSDQNDHSISETPEYSPFSGDSFAYCRSNSEVSNLSETIDDNSYASDPSPSPWMNVKHGAALSRLGMKQRKHSLGEKSDDLDLLESELEMMKERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLMSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLIEIFDSFQDTEFWYAEQGSMSGNSNRSSHSNAGSKAGSFRIIAQRKDEKWWLPVPCVHTGGLSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRSSLGDTIYRYMHSGDKFSPGNLLDCLKIRTEHEALELADRVESSMYTWRRKSCLSHSKSSWNKVKELMAETDHSDKNYLLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLESYSRVLEGLAFNIVAWIEDVLCADKSMRN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0935 470 ProSiteProfiles PRONE domain profile. 88 470 IPR005512 GO:0005085
Mtr8g0935 470 MobiDBLite consensus disorder prediction 1 30 - -
Mtr8g0935 470 Gene3D PRONE domain, subdomain 1 340 470 - -
Mtr8g0935 470 Gene3D PRONE domain, subdomain 1 91 335 - -
Mtr8g0935 470 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 317 470 IPR038937 GO:0005085
Mtr8g0935 470 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 317 IPR038937 GO:0005085
Mtr8g0935 470 Coils Coil 84 104 - -
Mtr8g0935 470 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 469 IPR005512 GO:0005085
Mtr8g0935 470 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 317 470 - -
Mtr8g0935 470 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0935 Mtr-Chr8 11523629 11527070 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0935 - - gmx:100785956 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0935 8 11523629 11527070 Mtr8g0935 8 11523629 11527070 ECH
Mtr7g1994 7 36018597 36022199 Mtr8g0935 8 11523629 11527070 PCT