Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0932 ATGCAAAGGTATCATGCTGGCAGCTGCACCAGTGCAGTTAATAACAGTACCATAGGCGGACCATCTTCCAGGGATACTGGAAGATCTGATTCTTCTTTTCCGGCTCACTTCCCTGTAAATTCAAGGTCTTCCATTCATAAATCGAATCCCGATTTGATAACCATGGGCTCAAGAAGTAAACAAAATATTAAAGGACAACCAAAGCGTTTTCCTATTATGCGGCGACAGCCACAGTTAAACATAAATCCATACAAGTTGAAGTGTGATAAAGAACCTTTGAACTCTAGGCTTGGGGCTCCTGATTTTCTTCCCCAAACACCAAACTGCCCTGAGGAGACTCTGACCAAAGAGTATTTGCAATCTGGATATAGAGATACAGTTGAGGGACTTGAGGAAGCTAGAGAAATTTCACTGACTCAGGTTCCACATTTTAACAAGCCAATTGTGCATAATTGCAGAGAGGCTATTAAAAAACGTCTAAGGGCCATCAATGAATCTCGTGCTCAGAAGCGGAAGGCTGGTCAAGTATATGGTGTACCTCTTTCGGGATTGCAACTTGCCAAGCCTGGTATTTTCCCTGAACTAAGGCCGTGTGGTGAGGACTTCCGGAAGAAATGGATTGAGGGCCTATCTCAACCACACAAGCGGTTATGCACTTTGGCTGACCATGTTCCTCATGGTTATAAAAGGTCATCACTTTTGGAGGTTCTTATCAGAAATAATGTTCCATTGCTAAGGGCCACTTGGTTTGTAAAGGTTACTTACCTGAATCAGGTTAGACCAGGTTCGGTTGGCATTTCTTCTGGGACTGCTGACAAAATTCAGCCGTCTCGTACAGAGATTTGGACCAAAGATGTTATCCATTACTTGCAAACTCTGCTCGATGAATTTTTCTCAAAAAATAATTCTCATTCTACTCTTCAGAATCGAGAGCGGTCACCGCAAATGCCGTATGCTGGAACACTGCTGCACAAAAGTGATCCATTATCATCCTTTTCTGCTGGTGAAGAACCATCTTCACATTTTAGATGGTGGTATATTGTTCGACTTTTGCAATGGCATCATGCTGAAGGGCTGATTCTTCCTTCTCTTGTTATTGATTGGGTTTTGAATCAACTACAGGAAAAAGATCTGCTTGAGGTTTGGGAGCTGTTATTGCCTATTATATACGGCTTCTTGGAAATTATTGTTCTGTCACAAAGCTATGTACGTGCACTTGCTGGATTAACTCTTCGGGTCATTCGTGATCCTGCTCCAGGTGGATCAGATCTAGTAGATAATTCCAGAAGGGCATATACAACATATGCTCTGATCGAGATGCTCCAATATTTAATACTTGCAGTGCCAGATACTTTTGTAGCTTTGGATTGCTTTCCTTTACCATCCTCTGTAGTCTCACATACAATGAACGATGGTAGTTTTGTATTAAAATCATCTGAAGCTGCAGGGAAGATAAAAAATAGTTCAGATTATTTTGGTCGCATTGTTTTATGTATTCAGAAACGTGCAGAAGATCTTGCCAAGGCTGCAAGCCCTGGCAATCCAAGTCATTGTCTTGCTAAGGTTGCGAAAGCCTTGGATAACTCTCTCGTGCTTGGTGATTTACGTGAAGCTTACAAGTTTCTTTTTGAGGATTTTTGTGATGGAACTGTGTCTGAAAGTTGGATTGTGAAAGTAAGCCCTTGTTTAAGGTTATCTCTGAAATGGTTTGGGACTGTAAAGACATCTCTTATACATTCAGTGTTTTTCCTCTGCGAGTGGGCAACATGTGATTTTCGGGATTTTTGTACTACCCCTCCTTGTGACATAAAGTTTACAGGCAGGAAAGATCTTTCCCAAGTGCATATAGCAGTTAGACTTTTGAAGATGAAATTGAGGGATGTGAAATCTTCACTAAGACGAGCAAAACGAAGCATTCACAGAGCTAGTTATGCTGCAAAGCATGAAAGTCAGAGGCATAATCAGAATTACATTACTACTGGTTCTTCAGTTATATCTGAAAGCCCAGGTCCTCTCCATGATATTATAGTTTGTTGGATTGATCAGCATGTGGTGCATAAAGGGGAAGGTCTGAAGCGCCTACATTTATTTATAGTTGAACTGATACGTGCAGGCATCTTTTACCCCTTGGCATATGTGCGCCAGTTGATAGTGAGTGGGATCATGAATATGGATGTCAATGTGGTTGATGTGGAGCGGAGAAAGAGACACTCACACATCTTAAAGCAGCTTCCTGGGCATTTCATGCGTGATGCTTTGACAGAATCTGGGATCGCTGAAGGGCCGCAGCTCATTGAAGCCTTGCAAACTTACTTGACTGAACGCCGCCTCATACTTCGTAATTCTCCTAGCGATCCCCGTGACGATGCCAATGCCAATAATGCCAAATTACCTACTTTGAAACGAAAACGAAATCCAGCTTCTTCAAAGGATGGGACTTCTACAGTGTCAACTGACCAGTGGAAAACTGTTCAATCCACTGCATCGTCTAAAAGTGCAAAGGATGGTGCTAGCATGGAAGAACTTAAAGAAACCATCTCAGTACTGTTACAACTACCTAACAGTTTATCTAATTTAAACTCTACAGGATGTGATGAATCTGAAAGCAGTGTTAGAAAACCTACCTGGCCTCATTATGGCAAGACTGAACCAGTGGAGGGCACACCTGGTTGTGAAGAATGTAGAAGAGCAAAGAGACAAAAGTTGAGTGAGGAAAGAAGCTCATCTGTTCCAGCTGATGATGATACATGGTGGGTGAAAAAGGGGTTGAAATCCACCGAACCTCTCAAAGTTGACCAACCTCAAAAGACTACCAAGCAGGTTACTAAGAGTCGTCAAAAGAACGTGCGGAAAATGAGTCTTGCTCAACTGGCAGCTTCTAGAATTGAGGGAAGCCAAGGGGCATCAACTAGTCACATGTGTGAGAATAAGGTAAGCTGCCCTCACCATAGAACTCCTGTAGATGGAGATGCTCTAAGGTCTGTGGATAGCATGCGAACATGTGACTCTAGGGATATTGTTTTCATCGGAAAAGCACTAAAGAAGCTTCGTTTTGTTGAGAAAAGGGCTGTGGCAGCTTGGTTGCTGACCGTTGTTAAGCAGGTGATTGAAGAAACTGAAAAAAATATTGGTAAAGTTGGACAATTTGGCAGGGCTTATTCTATGGTGGATGATAGAAACTCAATACGGTGGAAACTTGGCGAAGATGAACTTTCTGCGATACTTTATTTGATTGACATCTCTGATGATTTGGTATCAGCTGTCAAGTTTCTCCTTTGGTTGATGCCAAAGGTTCTCAGTAGCCCTAATTCTACAATTCATAGTGGGAGGAATGTTCTGATGCTACCAAGAAATGCGGAAAACCAAGTTTGTGATGTCGGAGAGGCTTTTCTTCTATCATCACTGAGAAGATATGAGAACATTCTTGTTGCGGCAGACCTTATTCCTGAAGCTTTGTCATCTACAATGCATCGTGCGGCCACTCTTATTGCTTCCAATGGGAGGGTGTCCAATTCAGGCGCCACAGCTTTTACTCGCTATTTATTGAAAAAATACAGTAATGTTGCTAGTGTCATTGAGTGGGAGAAAACTTTCAAGTCTACGTGTGATGCAAGACTCTCTGCTGAACTTGAGTCTGTTAGGTCAGTCGATGGAGAGTTGGGGTTGCCCTTTGGAGTTCCTGCAGGAGTTGAGGATCCGGATGATTTTTTCCGTCAGAAGATAAGTGGCAGCCGTTTACCTTCAAGAGTAGGGGCAGGCATGAGAGACATAGTGCAACGTAATGTTGAAGAGGCGTTCCAATATCTTTTTGGTAAAGATAGAAAGCTCTATGCTGCTGGCATTCCAAAAGGTCATGCTTTAGAAAAATGGGATAATGGATATCAAATTGCTCAACAAATTGTTATGGGTTTGATCGATAGCATAAAACAGACAGGGGGTGCTGCTCAAGAAGGGGATCCCTCTTTGGTATTGTCTGCCGTTTCTGCAATTGTTGGCAGTGTGGGTCCAACTTTAGCCAAAATGCCTGATTTTTCATCTAGCAATAATCAGTCAAATATAATGTCATTGAACTATGCCCGATGCATTCTGCGAATGCATATAACCTGTCTGCGCCTGCTTAAGGAAGCCCTAGGGGAACGCCAAAGCCGTGTGTTTGATATTGCCCTTGCAACCGAAGCTTCTAATGTTTTTGCTGGTGTTTTTGCTCCTAGTAAAGCATCTCGAGCTCAGTTTCAAATGTCTTCTGCTGAAGTCCATGATACCAGTGCCACTAATTCAAATGAATTGGGAAACAATTCTATTAAAACTGTGGTTACAAAAGCAACAAAAATTGCTGCTGCTGTTTCTGCGCTTGTTGTTGGTGCAGTTATATATGGTGTTACCAGCCTGGAAAGAATGGTTACCATTCTCAGGTTAAAGGAGGGACTTGACGTGATACAATGTATTAGAACCACAAGATCCAATTCAAATGGAAATGTCCGTTCTGTTGGGGCTTTTAAGGCAGATAGTTCAATCGAAGTTCACGTCCACTGGTTTAGATTGCTTATTGGAAACTGCAGAAGCCTCTGTGAAGGATTAGCGGTGGACCTCTTGGGTGAACCGTCTATTTCAGCTCTTTCAAGAATGCAACGCATGCTTCCTCTAAGTCTGATCTTTCCGCCTGCCTATTCAATATTTGCATTTGTTAGATGGCGGCCATTCATTCTGAATGCTAATGTCGCAGTTCGTGACGACATGAATCAACTTTATCAGTCTCTAACGATGGCCATAGCTGATGCTATAAAACATTCGCCTTTTCGTGATGTATGTTTTCGAGACTGTCAGGGGCTATATGATCTTATGGTTGCAGATGGAAGTGACGCTGAATTTGCAGCCCTGCTGGAGTTGAATGGCTCTGATATGCATTTAAAATCCATGGCTTTTGTTCCTCTTCGTTCTAGGCTTTTTCTGGATGCCATGATTGATTGTAAGATGCCACCATCTATTTTTACAAAGGATGATGTGAATCGTGTTTCTGGACCCAGTGAATCTAAAACTAAGCTTGCAAACGGCGATTCTAAGCTTCCGGATAAGCTTGTGCATGTTTTGGATACCTTGCAGCCTGCCAAATTTCACTGGCAGTGGGTTGCACTCAGGCTAATTTTAAATGAACAAACCCTCATCGAAAAACTGGACACACATGACGCGTCTTTATCTGATGCCATACAGTTGGCCTCACCTGGTCCGGATAAGGCTGCTTCCGAGAAGGAGAGTAATTTCATCGAAATACTTCTTACTAGGTTACTGGTTAGACCTGATGCCGCACCTCTTTTTTCACAGTTGGTACATCTCTTTGGTAGGTCACTACAGGATTCAATGCTGTTGCATGCTAAATGGTTCCTTGTAGGCCCAGATGTCCTTGTTGGTCGGAAGACAGTTAGGCAAAGGCTTCATAACATTGCCGAGAGTAAAAAACTTTCTTCCAAGACGCAGTATTGGGAGCCGTGGGGTTGGTGTAGTCCGTGTACTGATCCAGGGACTATCAAAGGAGACAAAAAGAAGTTTGATGCGGCATCACTAGAAGAAGGAGAAGTTGTCGATGAGGGGATAGATATGAAAAAGAGCCTTAAAAGACTCTCTCATGTGTCTCAAGTGTTTGACTCTGAAAGCTCAAGAATAAACCAGCAACATGTGACTGAGAGGGCTCTTATTGAGTTGCTTCTTCCTTGCATATACCAAAGCTCTGATGAATCCCGCAATTCCTTTGCTAATGATATGATAAAACAATTGTGTAGTATCGAGGGACATATAGCTGCTGTTACAGGTGGAGTTAAGCCAGTTGGAAGTACTCCTCCTGGGGTTGAAGGCCAGACAAATAAAGTGAATACCAAGAAAGGTATAAGAGGTGGAAGCCCTGGATTAGCTAGGCGACCGGCAGGTGCAACAGATTCTTCTCCACCATCTCCTGCAGCCCTACGTGTTTCAGTGTCACTTCGTTTGCAGTTACTCCTGAGATTTCTACCTATTCTCTGCACCGAAAGGGAGCCATCTGTACGGAACATGAGAAATAGTCTGGCCCCTGTAATTCTTCGTCTTCTGGGCAGCCGGGTTGTGTATGAGGATGCATATATTTTGTCGAATGCCGTACATTCTAAGAAGGATTTAGAGTTGTCTTCTGAAGCTGCTGCTTCTGCATTTGTAGACTTTTCTGCTGAGGGTCTATTTGATCGTTTGCTGTTAGTTTTACATGCGTTGTTGAGTAGTTATCCTGCAAGTTGGCTTAGGCTGAAACCTGGTTCGAAGTCTATCAATGAACCTACGAAGGAAGTTTCTGGATTTGACCGCGAATTTTTGGAGAGAATGCAGAATGACTTGGACCGTATGCAACTGCCTGATACTATCCGGTGGCGTATCCAAGCTGCAATGCCTGTACTTTTTCCCTCTACGCAGAGCTCTTTCTCCTGCCAGCCTCCACTTGTACCTACTTCTGCTGTTGTTTGTCTTCAAGCCAGCAATACAATTCCTGGCTTTAACTCCAGTAGTTCAGCTAACCCCCCTCTCAGGAGCCCAGTTCTATCAAGGGTTGCAGCTAATACATCAGCGAAGTCAAAACAACAGGACAGTGAATTGGATATTGATCCTTGGACGCTTTTAGAAGACGGCGCTGGATCTTGCCCTTCTGCAAGTAATATTGCTAGTATAGGTGGTGGTGACCATACTAATGTTCGAGCTGCGAGCTGGCTTAAAGGGGCTGTAAGGGTGAGAAGGACAGACCTCACATATGTTGGTGCTGTGGATGATGATAGTTGA 6789 0.4317 MQRYHAGSCTSAVNNSTIGGPSSRDTGRSDSSFPAHFPVNSRSSIHKSNPDLITMGSRSKQNIKGQPKRFPIMRRQPQLNINPYKLKCDKEPLNSRLGAPDFLPQTPNCPEETLTKEYLQSGYRDTVEGLEEAREISLTQVPHFNKPIVHNCREAIKKRLRAINESRAQKRKAGQVYGVPLSGLQLAKPGIFPELRPCGEDFRKKWIEGLSQPHKRLCTLADHVPHGYKRSSLLEVLIRNNVPLLRATWFVKVTYLNQVRPGSVGISSGTADKIQPSRTEIWTKDVIHYLQTLLDEFFSKNNSHSTLQNRERSPQMPYAGTLLHKSDPLSSFSAGEEPSSHFRWWYIVRLLQWHHAEGLILPSLVIDWVLNQLQEKDLLEVWELLLPIIYGFLEIIVLSQSYVRALAGLTLRVIRDPAPGGSDLVDNSRRAYTTYALIEMLQYLILAVPDTFVALDCFPLPSSVVSHTMNDGSFVLKSSEAAGKIKNSSDYFGRIVLCIQKRAEDLAKAASPGNPSHCLAKVAKALDNSLVLGDLREAYKFLFEDFCDGTVSESWIVKVSPCLRLSLKWFGTVKTSLIHSVFFLCEWATCDFRDFCTTPPCDIKFTGRKDLSQVHIAVRLLKMKLRDVKSSLRRAKRSIHRASYAAKHESQRHNQNYITTGSSVISESPGPLHDIIVCWIDQHVVHKGEGLKRLHLFIVELIRAGIFYPLAYVRQLIVSGIMNMDVNVVDVERRKRHSHILKQLPGHFMRDALTESGIAEGPQLIEALQTYLTERRLILRNSPSDPRDDANANNAKLPTLKRKRNPASSKDGTSTVSTDQWKTVQSTASSKSAKDGASMEELKETISVLLQLPNSLSNLNSTGCDESESSVRKPTWPHYGKTEPVEGTPGCEECRRAKRQKLSEERSSSVPADDDTWWVKKGLKSTEPLKVDQPQKTTKQVTKSRQKNVRKMSLAQLAASRIEGSQGASTSHMCENKVSCPHHRTPVDGDALRSVDSMRTCDSRDIVFIGKALKKLRFVEKRAVAAWLLTVVKQVIEETEKNIGKVGQFGRAYSMVDDRNSIRWKLGEDELSAILYLIDISDDLVSAVKFLLWLMPKVLSSPNSTIHSGRNVLMLPRNAENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSTMHRAATLIASNGRVSNSGATAFTRYLLKKYSNVASVIEWEKTFKSTCDARLSAELESVRSVDGELGLPFGVPAGVEDPDDFFRQKISGSRLPSRVGAGMRDIVQRNVEEAFQYLFGKDRKLYAAGIPKGHALEKWDNGYQIAQQIVMGLIDSIKQTGGAAQEGDPSLVLSAVSAIVGSVGPTLAKMPDFSSSNNQSNIMSLNYARCILRMHITCLRLLKEALGERQSRVFDIALATEASNVFAGVFAPSKASRAQFQMSSAEVHDTSATNSNELGNNSIKTVVTKATKIAAAVSALVVGAVIYGVTSLERMVTILRLKEGLDVIQCIRTTRSNSNGNVRSVGAFKADSSIEVHVHWFRLLIGNCRSLCEGLAVDLLGEPSISALSRMQRMLPLSLIFPPAYSIFAFVRWRPFILNANVAVRDDMNQLYQSLTMAIADAIKHSPFRDVCFRDCQGLYDLMVADGSDAEFAALLELNGSDMHLKSMAFVPLRSRLFLDAMIDCKMPPSIFTKDDVNRVSGPSESKTKLANGDSKLPDKLVHVLDTLQPAKFHWQWVALRLILNEQTLIEKLDTHDASLSDAIQLASPGPDKAASEKESNFIEILLTRLLVRPDAAPLFSQLVHLFGRSLQDSMLLHAKWFLVGPDVLVGRKTVRQRLHNIAESKKLSSKTQYWEPWGWCSPCTDPGTIKGDKKKFDAASLEEGEVVDEGIDMKKSLKRLSHVSQVFDSESSRINQQHVTERALIELLLPCIYQSSDESRNSFANDMIKQLCSIEGHIAAVTGGVKPVGSTPPGVEGQTNKVNTKKGIRGGSPGLARRPAGATDSSPPSPAALRVSVSLRLQLLLRFLPILCTEREPSVRNMRNSLAPVILRLLGSRVVYEDAYILSNAVHSKKDLELSSEAAASAFVDFSAEGLFDRLLLVLHALLSSYPASWLRLKPGSKSINEPTKEVSGFDREFLERMQNDLDRMQLPDTIRWRIQAAMPVLFPSTQSSFSCQPPLVPTSAVVCLQASNTIPGFNSSSSANPPLRSPVLSRVAANTSAKSKQQDSELDIDPWTLLEDGAGSCPSASNIASIGGGDHTNVRAASWLKGAVRVRRTDLTYVGAVDDDS* 2263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0932 2262 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 43 - -
Mtr8g0932 2262 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 65 2262 - -
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 780 838 - -
Mtr8g0932 2262 Pfam Transcription mediator complex subunit Med12 193 252 IPR019035 GO:0003712|GO:0006357|GO:0016592
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 809 834 - -
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 857 913 - -
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 930 950 - -
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 888 913 - -
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 1 64 - -
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 1939 1982 - -
Mtr8g0932 2262 MobiDBLite consensus disorder prediction 1 66 - -
Mtr8g0932 2262 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 65 2262 - -
Mtr8g0932 2262 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 43 - -
Mtr8g0932 2262 SMART Med12_2 191 252 IPR019035 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0932 Mtr-Chr8 11489317 11505022 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0932 - - gmx:100781696 3306.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0932 8 11489317 11505022 Mtr8g0932 8 11489317 11505022 ECH