Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0891 ATGGCAATTCTAAGATCAATACTGAAAGCAACAAAAACAACCCTTCAACATTCATCATCTCTTCTCCGTAACATGAGCAATCTCCCAGAAAACACAGTATACACAGGTCCAACACCACAAAACAAAAGAGTAACACTTTCACAACTACATCAAAAACATAAAAACTCACAACCAATCACAATGGTCACTGCTTATGATTACCCTTCTGCTGTTCACCTCGATATGGCCGCCATTGATATCTGTCTTGTTGGTGATTCTGCTTCCATGGTTGTTCATGGTCATGATACTACTTTGCCTATTACTTTAGATGAAATGCTTGTTCATTGTCGTGCTGTTGCTCGTGGTGCTAAAACTCCTCTTCTTGTTGGTGATTTGCCTTTTGGAACCTATGAATGTAGTTCTAATCAGGCAGTGGACACGGCAGTTCGAATTTTGAAAGAAGGACAAATGGATGCCATAAAGTTGGAAGGAGGTTCACCTTCAAGAATTGTTGCAGCAAAAGCTATTGTTGAAGCTGGAATAGCTGTGATTGGGCATGTTGGTCTTACTCCACAAGCCATTAGTGTTTTAGGAGGATTTAGGCCTCAGGGAAGGAATGTTGCAAGTGCTGTCAAGGTTGTCGAGACAGCATTGGCTTTGCAAGAAGCAGGGTGTTTTGCTGTTGTTCTTGAATGTGTGCCTGCACCGGTGGCTGCAGCAGCAACAGCGGCGCTTCAAATTCCTACAATTGGAATTGGGGCTGGTCCCTATTGCAGTGGACAGGTGCTTGTTTACCATGATCTTCTTGGTATGTTACAACACCCTCACCATGCAAAGGTGACTCCAAAATTTTGTAAACAGTACGCTCGTGTTGGAGACGTCATCAATAAAGCCTTACTGGAATATAAGGAAGATGTGATGAATGGTTCATTTCCTGATGCTCAACATAGTCCATACAAAATCAGTGAAACTGATGCTAATGGTTTCTTAAATGAGCTGCAAAAGTTAGGTTTTGACAAGGCTGCATCTGCGGCATCTGAAGCAGTTCAGAAGATGGTTTCAAAATCAACAAAGTAA 1056 0.4205 MAILRSILKATKTTLQHSSSLLRNMSNLPENTVYTGPTPQNKRVTLSQLHQKHKNSQPITMVTAYDYPSAVHLDMAAIDICLVGDSASMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYECSSNQAVDTAVRILKEGQMDAIKLEGGSPSRIVAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFAVVLECVPAPVAAAATAALQIPTIGIGAGPYCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVMNGSFPDAQHSPYKISETDANGFLNELQKLGFDKAASAASEAVQKMVSKSTK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0891 351 CDD KPHMT-like 46 305 IPR003700 GO:0003864|GO:0015940
Mtr8g0891 351 Pfam Ketopantoate hydroxymethyltransferase 43 306 IPR003700 GO:0003864|GO:0015940
Mtr8g0891 351 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 43 309 IPR015813 GO:0003824
Mtr8g0891 351 Gene3D - 41 322 IPR040442 -
Mtr8g0891 351 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 20 348 - -
Mtr8g0891 351 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 44 310 IPR003700 GO:0003864|GO:0015940
Mtr8g0891 351 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 44 311 IPR003700 GO:0003864|GO:0015940
Mtr8g0891 351 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 20 348 IPR003700 GO:0003864|GO:0015940
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0891 Mtr-Chr8 10963585 10967323 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0891 K00606 - gmx:100808841 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0891 8 10963585 10967323 Mtr8g0891 8 10963585 10967323 ECH