Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0883 ATGGCAGAGACCGATCAAGGAAGACCTTTAGCCCCAGTTAGAGTCCATCCAAGAAGTGATGATGAAGAAAAAGCTCTTAAAACCATGAACCGTAGAAGAAAAATCAAGTTATGTGGTTGTGTAACTGCAATTTTGCTACTACTTTTAGTCATAGTAATTGTTATCTTAGCATTCACGGTTTTTAAGGTTAAAGATCCAAAAGTAACAACTAATGAGATTCAACTCACAAACTTTGGCGTCAACCTTGTTCAAATTCCAACACCTCAAGTTAAGATCAACATGACCATGGTAGTGAACATGTCTATTAAGAATGATAATATAGCATCCATTAAGCTAGGAAACAGCACAACAACAGTGTATTACCGCGGTATAACGGTCGCGGACGCGGTAATACCACCGGGACTTGTGAAGGCAAAGAAGACAACAAGGTTGAATGTTACGATCGAAGTTATGGCGGACCGCCTTGTTTCTAGTCCGAATTTTGGGGGATGTGGTTCAAGGGGAGATGGTGATGAATACTTACTCCATAATTCCGGGGAGAGTGAAGATTTTGTTTATTAA 561 0.3993 MAETDQGRPLAPVRVHPRSDDEEKALKTMNRRRKIKLCGCVTAILLLLLVIVIVILAFTVFKVKDPKVTTNEIQLTNFGVNLVQIPTPQVKINMTMVVNMSIKNDNIASIKLGNSTTTVYYRGITVADAVIPPGLVKAKKTTRLNVTIEVMADRLVSSPNFGGCGSRGDGDEYLLHNSGESEDFVY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0883 186 MobiDBLite consensus disorder prediction 1 24 - -
Mtr8g0883 186 Gene3D - 51 169 - -
Mtr8g0883 186 SUPERFAMILY LEA14-like 47 157 - -
Mtr8g0883 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 156 - -
Mtr8g0883 186 Pfam Late embryogenesis abundant protein 100 156 IPR004864 -
Mtr8g0883 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0883 Mtr-Chr8 10871084 10872101 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0883 - - lja:Lj0g3v0344129.1 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0883 8 10871084 10872101 Mtr8g0883 8 10871084 10872101 ECH