Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0879 ATGTGGAGCACCATTGCTAATTTGAAAGAGAATTTGAACAAGATCGCACTCGATGTTCACGACAAAGACGAAGAAGAAGATGAAGTGAGCAAGGAATCTTCTGTCTCCGATAGCTGGAATTCTAACGGATTTGTCCGTTCTAATGGTGTTGATCGTGTTTTGCTTTCTGAGATAGAACAGTACAAAGCGGAAATCGAGAGACTTCAAGCCTCTGAGGCAGAAATTAAAGCACTGTCAATAAATTATGCAGCTCTATTAAAAGAAAAAGAGGATCTGATTGTTAGATTAAATAAAGAAAATGGTTCAATAAAGCAGAATTTGGAGGCTACAAATGCTGCTCTGAGTGCCTCCAGAATTGAAGGTTCTAGAGCATCTACAAGTGGCACTTCTTCAATCAAGGAGCTTGCAGATTCAGTTGATGGAAAAAATAGGTCCTCAAAAGCTGTGCAATATTCCCCAGAGATAAGAAAGTTGAAGTTAGAACTAAAGCAAGAACGTGATCAATTGACAAATGTTCAACTAAAATTTCGCGAGGAACAGGAATTGAACAAATCTTTTCGGGTGGAGCTTAAAAAGTTAAAATCGGAAAGAGAAAACACATCAAAGGAGACGAGCAAAATACAAAATGAATTGAATGAGAAAGCATCAGAAATAAAGCATCTACAATTTGAGCTGACTAGACGGCAAAACGAAGAATCAGTGGAGGCTTTTGATAGCTTGAAAAGACTAATCAAAACCTTAGAGAATGAAAATACCAATCTTAAGATGGAGAAGAGTGAAATTGAGGCCGCTCTTGAAAAAAGCAGGAAGTCTTTCACTGAAAAAATGTTGTCGGATGCTTTTCATATTCAGAAAAAGGATTTAAGCAGCATCAGTGATATGCCAGATCATTCTGACAATTTTCCTGGAAAGGAAGAAATGGAAAGATCCTTACAAAAGCTAAGTAACGATTTAAAGGAAACGCGGCGGGACAGGGACAAAGCATTAAAAGAATTGAGCCGCCTTAAGCAGCATTTGCTGGAAAAGGCATCTGAGGAAGCAGAAAAAATGGATGAGGATAGTATAATCATTGAAGAGCTTCGTGATAGCAATAACTATTTAAGGGCTCAGATATCACATCTCGAGAGAACTCTGACGCAAACAATTGCAAGTCAGGAGGAACTGAAGATGGCAAACAATATGGAAACTCTAAAGTCCAGGGAAATCATTGATGACCTGAATAAAAAGCTTACGAATTGTTTGAGCACAATAGATTCTAAAAATATTGAACTTTCAAATTTACAGACAGCTCTTGGACAGTACTATGCTGAAATTGAAGCCAAGGAACATTTAGAAGAGGAGTTAGCCTGGGCAAGAAAAGAAACAACTAAGCTTTCTCAACTGTTGAAAGATGCATATCAGAGAGCAGATATATCAAAGGCCGAAAATGAAGAAACTTTGGCCAAGCTTTCCCAATCTGAGAAGGCACAAACTGAATGGAAAGGTAGAGTAAGCAGGCTTGAGGAAGACAATGCCAGATTGAGGCGTGCTGTTGAGCAGAGTATGACACGGTTAAATAGAATGTCAGTGGATTCAGATCATCTCGTTGACAGGCGTATTGTTATCAAATTACTTGTGACGTATTTCCAGAGAAATCACAGCAGGGAGGTTTTGGATCTAATGGTTCGCATGCTAGGATTCTCTGATGAAGATAAGCAAAGGATAGGCATTGCTCAGCAAGGTGCAAGCAACAGTGTTATTCGAGGAGTTTTCCGGCTGCCTGGCCGCCTGGTGGGAGGCATTTTGGGAGGAAGTTCGACTGAAGCAGCGGCAAATGCAGGATCTCATAACCAGTCTTTTGCAGATCTGTGGGTTGATTTTCTTCTAAAGGAAACTGAAGAAAGAGAAAAGAGAGAATCAGCAGGAAATCCAGGTACATCCACTGAAAATTTACATGATAAAAGTCCAGATACTATTTCCACTACTCCCCCACTTCCCAATCAGAGGTTTGGATCTGTTCCACTTCCACCACTTCCCAATCAGAGGTCTGCATCTGCTTTTCCAATAAATTCAACAAATCAAAACCTCAGTCTTCTTCCTCCTAGCTACCTTCAGCGTCCTGAAAATTTTGGTTCTGACTTCTCAACAGTTCCTCTTACACCATCGGATGCCAAAACTTCTGGTTCGAACCTGATTCCGAGATACTGA 2187 0.4005 MWSTIANLKENLNKIALDVHDKDEEEDEVSKESSVSDSWNSNGFVRSNGVDRVLLSEIEQYKAEIERLQASEAEIKALSINYAALLKEKEDLIVRLNKENGSIKQNLEATNAALSASRIEGSRASTSGTSSIKELADSVDGKNRSSKAVQYSPEIRKLKLELKQERDQLTNVQLKFREEQELNKSFRVELKKLKSERENTSKETSKIQNELNEKASEIKHLQFELTRRQNEESVEAFDSLKRLIKTLENENTNLKMEKSEIEAALEKSRKSFTEKMLSDAFHIQKKDLSSISDMPDHSDNFPGKEEMERSLQKLSNDLKETRRDRDKALKELSRLKQHLLEKASEEAEKMDEDSIIIEELRDSNNYLRAQISHLERTLTQTIASQEELKMANNMETLKSREIIDDLNKKLTNCLSTIDSKNIELSNLQTALGQYYAEIEAKEHLEEELAWARKETTKLSQLLKDAYQRADISKAENEETLAKLSQSEKAQTEWKGRVSRLEEDNARLRRAVEQSMTRLNRMSVDSDHLVDRRIVIKLLVTYFQRNHSREVLDLMVRMLGFSDEDKQRIGIAQQGASNSVIRGVFRLPGRLVGGILGGSSTEAAANAGSHNQSFADLWVDFLLKETEEREKRESAGNPGTSTENLHDKSPDTISTTPPLPNQRFGSVPLPPLPNQRSASAFPINSTNQNLSLLPPSYLQRPENFGSDFSTVPLTPSDAKTSGSNLIPRY* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0879 728 PANTHER MYOSIN HEAVY CHAIN - RELATED 1 123 - -
Mtr8g0879 728 PANTHER MYOSIN HEAVY CHAIN - RELATED 133 728 - -
Mtr8g0879 728 Coils Coil 155 210 - -
Mtr8g0879 728 Coils Coil 5 25 - -
Mtr8g0879 728 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 133 728 - -
Mtr8g0879 728 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 1 123 - -
Mtr8g0879 728 Coils Coil 497 517 - -
Mtr8g0879 728 Coils Coil 230 271 - -
Mtr8g0879 728 MobiDBLite consensus disorder prediction 627 728 - -
Mtr8g0879 728 MobiDBLite consensus disorder prediction 676 728 - -
Mtr8g0879 728 Coils Coil 357 377 - -
Mtr8g0879 728 MobiDBLite consensus disorder prediction 636 661 - -
Mtr8g0879 728 Coils Coil 304 349 - -
Mtr8g0879 728 Coils Coil 51 106 - -
Mtr8g0879 728 MobiDBLite consensus disorder prediction 290 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0879 Mtr-Chr8 10835816 10844244 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0879 - - mtr:MTR_8g028445 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0879 8 10835816 10844244 Mtr8g0879 8 10835816 10844244 ECH
Mtr8g0879 8 10835816 10844244 Mtr7g2057 7 36799699 36809760 PCT